RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 HDXQ7Z353 690 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 KRT73Q86Y46 540 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 PIAS4Q8N2W9 510 aaPredicted RBP9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 MFSD8Q8NHS3 518 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 GTPBP3Q969Y2 492 aaKnown RBP9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 SPATA5L1Q9BVQ7 753 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 RABEP2Q9H5N1 569 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 TESQ9UGI8 421 aaKnown RBP9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 RASD1Q9Y272 281 aa9.17□□□□□ -0.94
HMGXB3-205ENST00000514469 IGKV1D-42A0A075B6H8 117 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 A0A1B0GWA3 101 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 PRORSD1PA6NEY8 169 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 ELOA3DA6NLF2 546 aaPredicted RBP9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 E7EQL1 145 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 M0R1B8 84 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 TPST1O60507 370 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 EDF1O60869 148 aaKnown RBP9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 RPS5P46782 204 aaKnown RBP9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 SELENOPP49908 381 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 TNK1Q13470 666 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 CLEC12BQ2HXU8 276 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 ELOA3BQ3SY89 546 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 GLIPR1L2Q4G1C9 344 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 RUNDC3AQ59EK9 446 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 TMEM225Q6GV28 225 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 SLC22A25Q6T423 547 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 DNM1P46Q6ZS02 220 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 ABHD12BQ7Z5M8 362 aaPredicted RBP9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 DHDDSQ86SQ9 333 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 EPHX4Q8IUS5 362 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 DPP10Q8N608 796 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 HIPK4Q8NE63 616 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 BHLHE22Q8NFJ8 381 aaPredicted RBP9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 ELOA3Q8NG57 546 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 DNAJA4Q8WW22 397 aaPredicted RBP9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 KTI12Q96EK9 354 aaPredicted RBP9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 ALKBH3Q96Q83 286 aaPredicted RBP9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 DHRS9Q9BPW9 319 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 SIKE1Q9BRV8 207 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 ALG2Q9H553 416 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 ARGLU1Q9NWB6 273 aaPredicted RBP9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 B3GAT1Q9P2W7 334 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 RPS6KB2Q9UBS0 482 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 SEC14L4Q9UDX3 406 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 LEF1Q9UJU2 399 aaPredicted RBP9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 FREM1Q5H8C1 2179 aa9.16□□□□□ -0.94
HMGXB3-205ENST00000514469 DSCAMO60469 2012 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 TRAV36DV7A0A075B6V5 113 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 A0A0B4J2E0 115 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 A0A1B0GX12 115 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 OR6C65A6NJZ3 312 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 EVPLLA8MZ36 301 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 ZNF587BE7ETH6 402 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 SASH3O75995 380 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 WNT11O96014 354 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 SLC6A2P23975 617 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 GTF2E2P29084 291 aaKnown RBP9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 TTKP33981 857 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 PCBP3P57721 371 aaKnown RBP9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 NCALDP61601 193 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 KRTAP1-1Q07627 177 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 LGALS3BPQ08380 585 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 VEZF1Q14119 521 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 HIKESHIQ53FT3 197 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 ALG10BQ5I7T1 473 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 FAM69AQ5T7M9 428 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 AGAP6Q5VW22 663 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 FAM91A1Q658Y4 838 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 ZNF544Q6NX49 715 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 NIPAL3Q6P499 406 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 ULK3Q6PHR2 472 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 KLHL24Q6TFL4 600 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 LINGO2Q7L985 606 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 RETREG3Q86VR2 466 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 PTOV1Q86YD1 416 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 ADPRHL1Q8NDY3 354 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 OR1K1Q8NGR3 316 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 OR6S1Q8NH40 331 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 SLC38A4Q969I6 547 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 TAAR8Q969N4 342 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 SLC25A36Q96CQ1 311 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 THOC1Q96FV9 657 aaKnown RBP9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 ZNF607Q96SK3 696 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 LINC00470Q9BZP3 86 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 EVA1AQ9H8M9 152 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 BARX1Q9HBU1 254 aaPredicted RBP9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 NPHS2Q9NP85 383 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 OBP2BQ9NPH6 170 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 KLHL14Q9P2G3 628 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 GDF2Q9UK05 429 aaPredicted RBP9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 POU2F3Q9UKI9 436 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 TRIM33Q9UPN9 1127 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 RCE1Q9Y256 329 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 ANGPT4Q9Y264 503 aa9.15□□□□□ -0.94
HMGXB3-205ENST00000514469 DNHD1Q96M86 4753 aa9.15□□□□□ -0.95
HMGXB3-205ENST00000514469 NAV3Q8IVL0 2385 aa9.15□□□□□ -0.95
HMGXB3-205ENST00000514469 A0A087WUJ7 227 aa9.14□□□□□ -0.95
HMGXB3-205ENST00000514469 ARPC4-TTLL3A0A0A6YYG9 625 aa9.14□□□□□ -0.95
HMGXB3-205ENST00000514469 M0R082 166 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms