RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 PTGES2Q9H7Z7 377 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 TREM2Q9NZC2 230 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 CAB39Q9Y376 341 aaPredicted RBP5.43□□□□□ -1.54
NUP54-215ENST00000514313 LRRK1Q38SD2 2015 aa5.43□□□□□ -1.54
NUP54-215ENST00000514313 NSG1A0A0A6YYJ2 146 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 SERTM2A0A1B0GWG4 89 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 CACNG3O60359 315 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 ASGR1P07306 291 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 P2RY4P51582 365 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 GPM6AP51674 278 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 ALKBH6Q3KRA9 238 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 RAET1LQ5VY80 246 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 FAM220AQ7Z4H9 259 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 GTPBP8Q8N3Z3 284 aaPredicted RBP5.42□□□□□ -1.54
NUP54-215ENST00000514313 TMEM252Q8N6L7 170 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 CCDC148Q8NFR7 591 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 ZNF564Q8TBZ8 553 aaPredicted RBP5.42□□□□□ -1.54
NUP54-215ENST00000514313 ACTR6Q9GZN1 396 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 INPP5EQ9NRR6 644 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 KIF25Q9UIL4 384 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 UGT2A1Q9Y4X1 527 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 V9GY05 133 aa5.42□□□□□ -1.54
NUP54-215ENST00000514313 IGHV3OR16-13A0A075B7E8 117 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 KLF18A0A0U1RQI7 1052 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 CCDC182A6NF36 153 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 A6NIZ1 184 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 KLK3P07288 261 aaPredicted RBP5.41□□□□□ -1.54
NUP54-215ENST00000514313 P0C879 139 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 UBTFL1P0CB47 393 aaPredicted RBP5.41□□□□□ -1.54
NUP54-215ENST00000514313 ANXA8P13928 327 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 SYKP43405 635 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 DIO3P55073 304 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 RAP1BP61224 184 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 SPANXN2Q5MJ10 180 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 ANXA8L1Q5VT79 327 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 C11orf71Q6IPW1 123 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 SLC25A48Q6ZT89 311 aaKnown RBP5.41□□□□□ -1.54
NUP54-215ENST00000514313 NIPA1Q7RTP0 329 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 PRSS41Q7RTY9 318 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 OR9A1PQ8NGU1 263 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 AGR3Q8TD06 166 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 SELENOIQ9C0D9 397 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 NCOR1P1Q9H4R4 102 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 GLRX2Q9NS18 164 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 DDX18Q9NVP1 670 aaKnown RBP5.41□□□□□ -1.54
NUP54-215ENST00000514313 KIAA1257Q9ULG3 409 aa5.41□□□□□ -1.54
NUP54-215ENST00000514313 C9JVG2 144 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 ZNF43P17038 809 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 CXCR2P25025 360 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 VHLP40337 213 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 BTDP43251 543 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 YAP1P46937 504 aaKnown RBP5.4□□□□□ -1.54
NUP54-215ENST00000514313 ACLYP53396 1101 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 KIAA0040Q15053 153 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 TGFBIQ15582 683 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 TIGD3Q6B0B8 471 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 ZNF774Q6NX45 483 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 Q6ZN92 141 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 C6orf223Q8N319 242 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 BRSK1Q8TDC3 778 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 PYROXD1Q8WU10 500 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 OR1E3Q8WZA6 343 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 MCUR1Q96AQ8 359 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 CHP1Q99653 195 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 NAT9Q9BTE0 207 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 FAIM2Q9BWQ8 316 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 ILKAPQ9H0C8 392 aaPredicted RBP5.4□□□□□ -1.54
NUP54-215ENST00000514313 EXO5Q9H790 373 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 TMEM185BQ9H7F4 350 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 ZNF160Q9HCG1 818 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 GIN1Q9NXP7 522 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 VNN3Q9NY84 501 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 B4GALT7Q9UBV7 327 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 MMP17Q9ULZ9 603 aa5.4□□□□□ -1.54
NUP54-215ENST00000514313 FAM168BA1KXE4 195 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 DNAJB6O75190 326 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 CDH16O75309 829 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 KRT6AP02538 564 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 SLC26A2P50443 739 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 DSCR10P59022 87 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 SELENOTP62341 195 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 RPS15P62841 145 aaKnown RBP5.39□□□□□ -1.55
NUP54-215ENST00000514313 ASCL5Q7RTU5 278 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 PIANPQ8IYJ0 282 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 PLPPR1Q8TBJ4 325 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 ITCHQ96J02 903 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 MS4A4EQ96PG1 132 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 SMIM14Q96QK8 99 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 C20orf85Q9H1P6 137 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 EHD1Q9H4M9 534 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 TMEM9Q9P0T7 183 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 CLEC4EQ9ULY5 219 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 TRAF3IP3Q9Y228 551 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 WDR19Q8NEZ3 1342 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 NINLQ9Y2I6 1382 aa5.39□□□□□ -1.55
NUP54-215ENST00000514313 IGLV3-22A0A075B6J6 115 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 GOSR2O14653 212 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 LSM1O15116 133 aaKnown RBP5.38□□□□□ -1.55
NUP54-215ENST00000514313 FTH1P02794 183 aa5.38□□□□□ -1.55
NUP54-215ENST00000514313 HSPB1P04792 205 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms