RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 KDM8Q8N371 416 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 FITM2Q8N6M3 262 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 WFDC11Q8NEX6 87 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 KBTBD8Q8NFY9 601 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 OR10A6Q8NH74 314 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 RP9Q8TA86 221 aaKnown RBP5.74□□□□□ -1.49
KDM3B-208ENST00000512928 TMEM171Q8WVE6 324 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 GTPBP3Q969Y2 492 aaKnown RBP5.74□□□□□ -1.49
KDM3B-208ENST00000512928 KTI12Q96EK9 354 aaPredicted RBP5.74□□□□□ -1.49
KDM3B-208ENST00000512928 ANKRD27Q96NW4 1050 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 CGREF1Q99674 301 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 SMR3AQ99954 134 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 USB1Q9BQ65 265 aaKnown RBP5.74□□□□□ -1.49
KDM3B-208ENST00000512928 C1QTNF6Q9BXI9 259 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 RSPO3Q9BXY4 272 aaPredicted RBP5.74□□□□□ -1.49
KDM3B-208ENST00000512928 TRIM2Q9C040 744 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 CXXC4Q9H2H0 198 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 CXorf56Q9H5V9 222 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 TMEM38AQ9H6F2 299 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 KAT8Q9H7Z6 458 aaKnown RBP5.74□□□□□ -1.49
KDM3B-208ENST00000512928 TMEM27Q9HBJ8 222 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 TAS2R16Q9NYV7 291 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 TESQ9UGI8 421 aaKnown RBP5.74□□□□□ -1.49
KDM3B-208ENST00000512928 POU2F3Q9UKI9 436 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 LAMP3Q9UQV4 416 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 FLVCR1Q9Y5Y0 555 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 MPDZO75970 2070 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 ZNF469Q96JG9 3925 aaPredicted RBP5.74□□□□□ -1.49
KDM3B-208ENST00000512928 NF1P21359 2839 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 DNHD1Q96M86 4753 aa5.74□□□□□ -1.49
KDM3B-208ENST00000512928 LOC100653049A0A140TA62 436 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 OR5H1A6NKK0 313 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 CPSF4LA6NMK7 179 aaKnown RBP5.73□□□□□ -1.49
KDM3B-208ENST00000512928 TMEM229AB2RXF0 380 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 M0QX08 132 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 M0R082 166 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 KPNA4O00629 521 aaPredicted RBP5.73□□□□□ -1.49
KDM3B-208ENST00000512928 ABCD4O14678 606 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 HS3ST1O14792 307 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 MRASO14807 208 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 SERPINI2O75830 405 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 DCTN3O75935 186 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 KRT34O76011 436 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 CNOT4O95628 575 aaKnown RBP5.73□□□□□ -1.49
KDM3B-208ENST00000512928 T-ENOLP0DO92 83 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 COX4I1P13073 169 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 COX5AP20674 150 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 LOXP28300 417 aaPredicted RBP5.73□□□□□ -1.49
KDM3B-208ENST00000512928 NTF4P34130 210 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 SELENOPP49908 381 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 CDH11P55287 796 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 CLDN17P56750 224 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 H3F3AP84243 136 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 TGFBR3Q03167 851 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 DMTNQ08495 405 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 RBBP4Q09028 425 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 OR1Q1Q15612 314 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 RABL3Q5HYI8 236 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 TIMM23BQ5SRD1 257 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 NCMAPQ5T1S8 102 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 INTS11Q5TA45 600 aaKnown RBP5.73□□□□□ -1.49
KDM3B-208ENST00000512928 TSPO2Q5TGU0 170 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 REP15Q6BDI9 236 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 ULK3Q6PHR2 472 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 SLC22A25Q6T423 547 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 KLHL17Q6TDP4 642 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 TMEM108Q6UXF1 575 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 YTHDF3Q7Z739 585 aaKnown RBP5.73□□□□□ -1.49
KDM3B-208ENST00000512928 PATL1Q86TB9 770 aaKnown RBP5.73□□□□□ -1.49
KDM3B-208ENST00000512928 SNX32Q86XE0 403 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 PTOV1Q86YD1 416 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 SLC30A8Q8IWU4 369 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 ZNF433Q8N7K0 673 aaPredicted RBP5.73□□□□□ -1.49
KDM3B-208ENST00000512928 CCDC197Q8NCU1 140 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 BHLHE22Q8NFJ8 381 aaPredicted RBP5.73□□□□□ -1.49
KDM3B-208ENST00000512928 OR8J3Q8NGG0 315 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 MFSD8Q8NHS3 518 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 ZNF417Q8TAU3 575 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 STK35Q8TDR2 534 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 DNAJA4Q8WW22 397 aaPredicted RBP5.73□□□□□ -1.49
KDM3B-208ENST00000512928 NEUROG1Q92886 237 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 SLC38A4Q969I6 547 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 SLC35B4Q969S0 331 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 FBXW5Q969U6 566 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 SLC47A1Q96FL8 570 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 RADILQ96JH8 1075 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 ZNF385AQ96PM9 386 aaKnown RBP5.73□□□□□ -1.49
KDM3B-208ENST00000512928 ALKBH3Q96Q83 286 aaPredicted RBP5.73□□□□□ -1.49
KDM3B-208ENST00000512928 ZNF587Q96SQ5 575 aaPredicted RBP5.73□□□□□ -1.49
KDM3B-208ENST00000512928 SH3GL1Q99961 368 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 ECSITQ9BQ95 431 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 SF3B5Q9BWJ5 86 aaKnown RBP5.73□□□□□ -1.49
KDM3B-208ENST00000512928 SLCO5A1Q9H2Y9 848 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 ALG2Q9H553 416 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 SLC7A10Q9NS82 523 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 SEC14L4Q9UDX3 406 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 MALT1Q9UDY8 824 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 RASD1Q9Y272 281 aa5.73□□□□□ -1.49
KDM3B-208ENST00000512928 TRAV36DV7A0A075B6V5 113 aa5.72□□□□□ -1.49
KDM3B-208ENST00000512928 DPRXA6NFQ7 191 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms