RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 ZNF615Q8N8J6 731 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 SDR9C7Q8NEX9 313 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 CHTF18Q8WVB6 975 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 MAFIPQ8WZ33 124 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 FBXO32Q969P5 355 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 UBL7Q96S82 380 aaPredicted RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 MGME1Q9BQP7 344 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 PIGMQ9H3S5 423 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 SYNDIG1Q9H7V2 258 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 FBRSQ9HAH7 460 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 TRPV4Q9HBA0 871 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 RHOFQ9HBH0 211 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 CREBZFQ9NS37 354 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 USP36Q9P275 1121 aaKnown RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 KLHL9Q9P2J3 617 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 CAMK2AQ9UQM7 478 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 TRIP12Q14669 1992 aaPredicted RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 CHD3Q12873 2000 aaKnown RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 MYO7AQ13402 2215 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 TRAV18A0A075B6X5 111 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 NPIPA5A0A0B4J1W7 369 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 TRBV2A0A0J9YWF9 115 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 ARGFXA6NJG6 315 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 C19orf81C9J6K1 198 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 NPIPA7E9PJI5 369 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 BLOC1S5-TXNDC5H3BN57 136 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 HMGN4O00479 90 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 PPP1R3DO95685 299 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 ADH1AP07327 375 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 UBBP0CG47 229 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 NPIPA8P0DM63 369 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 FABP4P15090 132 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF25P17030 456 aaPredicted RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 APLNRP35414 380 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 SNRPNP63162 240 aaKnown RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 PITPNAQ00169 270 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 PURAQ00577 322 aaKnown RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 SQSTM1Q13501 440 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF630Q2M218 657 aaPredicted RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 RNF212Q495C1 297 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 PRPF38BQ5VTL8 546 aaKnown RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 AADACL4Q5VUY2 407 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 OR10K2Q6IF99 312 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 IKBIPQ70UQ0 350 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 TRAPPC5Q8IUR0 188 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 OR6V1Q8N148 313 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 EIF4E3Q8N5X7 224 aaKnown RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 BRIX1Q8TDN6 353 aaKnown RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 RAB7BQ96AH8 199 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 FOXN4Q96NZ1 517 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 IL36AQ9UHA7 158 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 CA14Q9ULX7 337 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 C5orf51A6NDU8 294 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF705GA8MUZ8 300 aaPredicted RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 F5H5T6 163 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 SURF4O15260 269 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 FCMRO60667 390 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 SLC34A2O95436 690 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 MBP02144 154 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 MBPP02686 304 aaPredicted RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 RHOCP08134 193 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 MMP7P09237 267 aaPredicted RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 FURINP09958 794 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 OR13C7P0DN81 318 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 MGMTP16455 207 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 AKR1C4P17516 323 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 PI3P19957 117 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 PCSK1P29120 753 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 TIA1P31483 386 aaKnown RBP eCLIP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 FHITP49789 147 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 LSM6P62312 80 aaKnown RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 AIMP2Q13155 320 aaKnown RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 EIF4EBP2Q13542 120 aaPredicted RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 SLBPQ14493 270 aaKnown RBP eCLIP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 LY6G6FQ5SQ64 297 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 FUT10Q6P4F1 479 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 FAM199XQ6PEV8 388 aaPredicted RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 AGTRAPQ6RW13 159 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 DHRS11Q6UWP2 260 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 NAXDQ8IW45 347 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 LINC00471Q8N535 108 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 MORN4Q8NDC4 146 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 PFN4Q8NHR9 129 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 CCDC107Q8WV48 283 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 MYADMQ96S97 322 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 GFI1Q99684 422 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 TRIM36Q9NQ86 728 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 C20orf141Q9NUB4 165 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 ANKRD10Q9NXR5 420 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 ASIC5Q9NY37 505 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 TREM2Q9NZC2 230 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 IL17BQ9UHF5 180 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 KCND3Q9UK17 655 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 ADAMTS5Q9UNA0 930 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 LTBP3Q9NS15 1303 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 XIRP1Q702N8 1843 aaKnown RBP6.67□□□□□ -1.34
LIMCH1-207ENST00000508466 RNF222A6NCQ9 220 aa6.67□□□□□ -1.34
LIMCH1-207ENST00000508466 CLDN4O14493 209 aa6.67□□□□□ -1.34
LIMCH1-207ENST00000508466 EREGO14944 169 aa6.67□□□□□ -1.34
LIMCH1-207ENST00000508466 MOSPD3O75425 235 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms