RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 SLC7A6OSQ96CW6 309 aaPredicted RBP16.13■□□□□ 0.17
NPHP4-210ENST00000506941 LRRC46Q96FV0 321 aa16.13■□□□□ 0.17
NPHP4-210ENST00000506941 MPP4Q96JB8 637 aa16.13■□□□□ 0.17
NPHP4-210ENST00000506941 PRRC1Q96M27 445 aa16.13■□□□□ 0.17
NPHP4-210ENST00000506941 ZNF587Q96SQ5 575 aaPredicted RBP16.13■□□□□ 0.17
NPHP4-210ENST00000506941 EPYCQ99645 322 aa16.13■□□□□ 0.17
NPHP4-210ENST00000506941 EMC3Q9P0I2 261 aa16.13■□□□□ 0.17
NPHP4-210ENST00000506941 PRPF19Q9UMS4 504 aaKnown RBP16.13■□□□□ 0.17
NPHP4-210ENST00000506941 SAMD4AQ9UPU9 718 aaKnown RBP16.13■□□□□ 0.17
NPHP4-210ENST00000506941 FLVCR1Q9Y5Y0 555 aa16.13■□□□□ 0.17
NPHP4-210ENST00000506941 V9GYQ6 96 aa16.13■□□□□ 0.17
NPHP4-210ENST00000506941 LRBAP50851 2863 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 KPNA4O00629 521 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-210ENST00000506941 OR2T1O43869 369 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 PRSS23O95084 383 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 SEMG1P04279 462 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 CCKARP32238 428 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 CD79BP40259 229 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 OR3A2P47893 321 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 UGT2B15P54855 530 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 FOXD4Q12950 439 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-210ENST00000506941 EXOC3L2Q2M3D2 409 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 TTC33Q6PID6 262 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-210ENST00000506941 GALNT5Q7Z7M9 940 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 ZIC4Q8N9L1 334 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 OR9K2Q8NGE7 335 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 OR6S1Q8NH40 331 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 MARVELD3Q96A59 401 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 C7orf34Q96L11 122 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 NSMCE2Q96MF7 247 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 MEPEQ9NQ76 525 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-210ENST00000506941 MAN2C1Q9NTJ4 1040 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 RHCGQ9UBD6 479 aa16.12■□□□□ 0.17
NPHP4-210ENST00000506941 HNRNPRO43390 633 aaKnown RBP16.11■□□□□ 0.17
NPHP4-210ENST00000506941 THRBP10828 461 aa16.11■□□□□ 0.17
NPHP4-210ENST00000506941 VLDLRP98155 873 aa16.11■□□□□ 0.17
NPHP4-210ENST00000506941 SORDQ00796 357 aa16.11■□□□□ 0.17
NPHP4-210ENST00000506941 MS4A2Q01362 244 aa16.11■□□□□ 0.17
NPHP4-210ENST00000506941 BNIP1Q12981 228 aa16.11■□□□□ 0.17
NPHP4-210ENST00000506941 CYP2R1Q6VVX0 501 aa16.11■□□□□ 0.17
NPHP4-210ENST00000506941 GPAT4Q86UL3 456 aa16.11■□□□□ 0.17
NPHP4-210ENST00000506941 OFCC1Q8IZS5 231 aa16.11■□□□□ 0.17
NPHP4-210ENST00000506941 KDM8Q8N371 416 aa16.11■□□□□ 0.17
NPHP4-210ENST00000506941 PFN4Q8NHR9 129 aa16.11■□□□□ 0.17
NPHP4-210ENST00000506941 SF3B5Q9BWJ5 86 aaKnown RBP16.11■□□□□ 0.17
NPHP4-210ENST00000506941 ACTR3BQ9P1U1 418 aa16.11■□□□□ 0.17
NPHP4-210ENST00000506941 B3GAT1Q9P2W7 334 aa16.11■□□□□ 0.17
NPHP4-210ENST00000506941 PRSS50Q9UI38 385 aa16.11■□□□□ 0.17
NPHP4-210ENST00000506941 NOSIPQ9Y314 301 aaKnown RBP16.11■□□□□ 0.17
NPHP4-210ENST00000506941 ENPP4Q9Y6X5 453 aa16.11■□□□□ 0.17
NPHP4-210ENST00000506941 GPR171O14626 319 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 HPRP00739 348 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 POU2F1P14859 743 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 GTF2E2P29084 291 aaKnown RBP16.1■□□□□ 0.17
NPHP4-210ENST00000506941 RBM34P42696 430 aaKnown RBP16.1■□□□□ 0.17
NPHP4-210ENST00000506941 PCYT1AP49585 367 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 ZNF74Q16587 644 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 IQCCQ4KMZ1 466 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 TMEM225Q6GV28 225 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 KIF18BQ86Y91 864 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 ZNF295-AS1Q8N0V1 137 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 GABRG1Q8N1C3 465 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 PYURFQ96I23 114 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 ZNF385AQ96PM9 386 aaKnown RBP16.1■□□□□ 0.17
NPHP4-210ENST00000506941 THTPAQ9BU02 230 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 SLC19A3Q9BZV2 496 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 ELOVL5Q9NYP7 299 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 NDUFAF4Q9P032 175 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 C6orf203Q9P0P8 240 aaPredicted RBP16.1■□□□□ 0.17
NPHP4-210ENST00000506941 RASD1Q9Y272 281 aa16.1■□□□□ 0.17
NPHP4-210ENST00000506941 CYSRT1A8MQ03 144 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 MS4A18H0YCH9 400 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 hCG_2039718K7EN88 272 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 GYG2O15488 501 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 PIP5K1CO60331 668 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 VAMP5O95183 116 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 CH25HO95992 272 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 PRF1P14222 555 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 UGT2B10P36537 528 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 LSM11P83369 360 aaKnown RBP eCLIP16.09■□□□□ 0.17
NPHP4-210ENST00000506941 ST3GAL3Q11203 375 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 TRIM25Q14258 630 aaKnown RBP16.09■□□□□ 0.17
NPHP4-210ENST00000506941 MFSD13AQ14CX5 517 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 POU4F3Q15319 338 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 MS4A18Q3C1V0 323 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 STAC2Q6ZMT1 411 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 BEND4Q6ZU67 534 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 CREB3L2Q70SY1 520 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 H1FNTQ75WM6 255 aaPredicted RBP16.09■□□□□ 0.17
NPHP4-210ENST00000506941 SLC46A3Q7Z3Q1 461 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 STK32CQ86UX6 486 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 EPHX4Q8IUS5 362 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 C10orf53Q8N6V4 93 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 LRRC17Q8N6Y2 441 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 SCAIQ8N9R8 606 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 ADPRHL1Q8NDY3 354 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 LINC01560Q8TB33 94 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 TMEM239Q8WW34 195 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 TMEM45BQ96B21 275 aa16.09■□□□□ 0.17
NPHP4-210ENST00000506941 CCDC124Q96CT7 223 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms