RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 RMND5AQ9H871 391 aa14.01□□□□□ -0.17
PDLIM7-213ENST00000505074 FKRPQ9H9S5 495 aa14.01□□□□□ -0.17
PDLIM7-213ENST00000505074 ADPRHL2Q9NX46 363 aa14.01□□□□□ -0.17
PDLIM7-213ENST00000505074 DCTN4Q9UJW0 460 aa14.01□□□□□ -0.17
PDLIM7-213ENST00000505074 RAB21Q9UL25 225 aa14.01□□□□□ -0.17
PDLIM7-213ENST00000505074 ZNF443Q9Y2A4 671 aaPredicted RBP14.01□□□□□ -0.17
PDLIM7-213ENST00000505074 CDHR4A6H8M9 788 aa14□□□□□ -0.17
PDLIM7-213ENST00000505074 GSTA3Q16772 222 aa14□□□□□ -0.17
PDLIM7-213ENST00000505074 SLC9B1Q4ZJI4 515 aa14□□□□□ -0.17
PDLIM7-213ENST00000505074 TMEM225Q6GV28 225 aa14□□□□□ -0.17
PDLIM7-213ENST00000505074 WBP2NLQ6ICG8 309 aa14□□□□□ -0.17
PDLIM7-213ENST00000505074 B3GLCTQ6Y288 498 aa14□□□□□ -0.17
PDLIM7-213ENST00000505074 C17orf78Q8N4C9 275 aa14□□□□□ -0.17
PDLIM7-213ENST00000505074 C1orf162Q8NEQ5 155 aaPredicted RBP14□□□□□ -0.17
PDLIM7-213ENST00000505074 OR9K2Q8NGE7 335 aa14□□□□□ -0.17
PDLIM7-213ENST00000505074 C3orf49Q96BT1 292 aa14□□□□□ -0.17
PDLIM7-213ENST00000505074 AURKBQ96GD4 344 aaPredicted RBP14□□□□□ -0.17
PDLIM7-213ENST00000505074 ITCHQ96J02 903 aa14□□□□□ -0.17
PDLIM7-213ENST00000505074 PRR14Q9BWN1 585 aa14□□□□□ -0.17
PDLIM7-213ENST00000505074 ARMC7Q9H6L4 198 aa14□□□□□ -0.17
PDLIM7-213ENST00000505074 SLC17A5Q9NRA2 495 aa14□□□□□ -0.17
PDLIM7-213ENST00000505074 SLC6A13Q9NSD5 602 aa14□□□□□ -0.17
PDLIM7-213ENST00000505074 ZNF232Q9UNY5 417 aa14□□□□□ -0.17
PDLIM7-213ENST00000505074 HEATR1Q9H583 2144 aaKnown RBP14□□□□□ -0.17
PDLIM7-213ENST00000505074 TENM1Q9UKZ4 2725 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 LIPT2A6NK58 231 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 VWC2LB2RUY7 222 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 NDUFS8O00217 210 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 SNNO75324 88 aaPredicted RBP13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 WNT11O96014 354 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 GTF2E2P29084 291 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 MPGP29372 298 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 SRP14P37108 136 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 PDLIM4P50479 330 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 PRPS1P60891 318 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 GTDC1Q4AE62 458 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 ABHD12BQ7Z5M8 362 aaPredicted RBP13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 C3orf56Q8N813 242 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 WDR31Q8NA23 367 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 TMEM19Q96HH6 336 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 ZNF385AQ96PM9 386 aaKnown RBP13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 KCNS3Q9BQ31 491 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 PIMREGQ9BSJ6 248 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 TPT1P8Q9HAU6 139 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 PMF1-BGLAPU3KQ54 211 aa13.99□□□□□ -0.17
PDLIM7-213ENST00000505074 AQP7P3A6NL99 342 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 A8MVM7 634 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 PDLIM1O00151 329 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 KLF11O14901 512 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 UBDO15205 165 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 NR4A2P43354 598 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 POLR2JP52435 117 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 MAGOHP61326 146 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 SLC25A3Q00325 362 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 CHRNB3Q05901 458 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 HIKESHIQ53FT3 197 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 RNF220Q5VTB9 566 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 PRAMEF8Q5VWM4 474 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 PRAMEF7Q5VXH5 474 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 ZNF544Q6NX49 715 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 POMGNT2Q8NAT1 580 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 OR9I1Q8NGQ6 314 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 SLC38A5Q8WUX1 472 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 ZFAND2BQ8WV99 257 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 VPS33AQ96AX1 596 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 TMEM45BQ96B21 275 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 SF3B5Q9BWJ5 86 aaKnown RBP13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 ZIM2Q9NZV7 527 aa13.98□□□□□ -0.17
PDLIM7-213ENST00000505074 DSPPQ9NZW4 1301 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 C5orf58C9J3I9 102 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 ZNF587BE7ETH6 402 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 ATP6V1G2-DDX39BF2Z307 99 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 FRS3O43559 492 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 LY6HO94772 140 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 AHSA1O95433 338 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 PRG2P13727 222 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 ACAA2P42765 397 aaKnown RBP13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 UBE2NP61088 152 aaKnown RBP13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 STX1BP61266 288 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 MAPK11Q15759 364 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 ZNF311Q5JNZ3 666 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 C1orf140Q5VVS0 124 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 NIPAL3Q6P499 406 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 SERPINA11Q86U17 422 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 MIER2Q8N344 545 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 CLIP4Q8N3C7 705 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 SLC25A36Q96CQ1 311 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 ALKBH3Q96Q83 286 aaPredicted RBP13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 OR52B2Q96RD2 323 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 TMEM45AQ9NWC5 275 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 THUMPD1Q9NXG2 353 aaKnown RBP13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 RPS6KB2Q9UBS0 482 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 MOKQ9UQ07 419 aa13.97□□□□□ -0.17
PDLIM7-213ENST00000505074 A0A0A6YYJ9 748 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 A0A0G2JPF8 293 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 HNRNPCL2B2RXH8 293 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 HNRNPCL3B7ZW38 293 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 HNRNPCL1O60812 293 aaKnown RBP13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 LGI1O95970 557 aa13.96□□□□□ -0.17
PDLIM7-213ENST00000505074 TFPTP0C1Z6 253 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms