RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ZNF286AQ9HBT8 521 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 CRYZL1O95825 349 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 EIF1P41567 113 aaKnown RBP17.77■□□□□ 0.44
COL27A1-207ENST00000494090 SLX4IPQ5VYV7 408 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 BEST4Q8NFU0 473 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 QRSL1Q9H0R6 528 aaKnown RBP17.77■□□□□ 0.44
COL27A1-207ENST00000494090 SEMA6CQ9H3T2 930 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 KCND3Q9UK17 655 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 EDARQ9UNE0 448 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 CORINQ9Y5Q5 1042 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 SUSD5O60279 629 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 IL2RGP31785 369 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 POU4F3Q15319 338 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 DPY19L4Q7Z388 723 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 ZNF740Q8NDX6 193 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 OR7G1Q8NGA0 311 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 PSMF1Q92530 271 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 MALSU1Q96EH3 234 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 C1orf198Q9H425 327 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 GLIPR2Q9H4G4 154 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 RANGRFQ9HD47 186 aaPredicted RBP17.77■□□□□ 0.44
COL27A1-207ENST00000494090 RBFOX1Q9NWB1 397 aaKnown RBP17.77■□□□□ 0.44
COL27A1-207ENST00000494090 A3GALT2U3KPV4 340 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 TLCD2A6NGC4 264 aa17.77■□□□□ 0.43
COL27A1-207ENST00000494090 EIF1BO60739 113 aaKnown RBP17.77■□□□□ 0.43
COL27A1-207ENST00000494090 TK1P04183 234 aa17.77■□□□□ 0.43
COL27A1-207ENST00000494090 SMIM18P0DKX4 95 aa17.77■□□□□ 0.43
COL27A1-207ENST00000494090 HTR1FP30939 366 aa17.77■□□□□ 0.43
COL27A1-207ENST00000494090 SIRPAP78324 504 aa17.77■□□□□ 0.43
COL27A1-207ENST00000494090 AAED1Q7RTV5 226 aa17.77■□□□□ 0.43
COL27A1-207ENST00000494090 PSD2Q9BQI7 771 aa17.77■□□□□ 0.43
COL27A1-207ENST00000494090 NIPAL2Q9H841 368 aa17.77■□□□□ 0.43
COL27A1-207ENST00000494090 MED20Q9H944 212 aa17.77■□□□□ 0.43
COL27A1-207ENST00000494090 CCL26Q9Y258 94 aa17.77■□□□□ 0.43
COL27A1-207ENST00000494090 OR2A25A4D2G3 310 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 NPPBP16860 134 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 OR5M11Q96RB7 305 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 NRIP3Q9NQ35 241 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 TAS2R16Q9NYV7 291 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 ADAMTSL3P82987 1691 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 ZNF780AO75290 641 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-207ENST00000494090 LYPD4Q6UWN0 246 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 GIMAP1Q8WWP7 306 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 LCORQ96JN0 433 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-207ENST00000494090 SAV1Q9H4B6 383 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-207ENST00000494090 SIDT1Q9NXL6 827 aaKnown RBP17.76■□□□□ 0.43
COL27A1-207ENST00000494090 SNX11Q9Y5W9 270 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 PDE4DIPQ5VU43 2346 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 ANKRD33BA6NCL7 494 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 HLA-DMAP28067 261 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 RAB4BP61018 213 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 SPOCK1Q08629 439 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 TMEM176BQ3YBM2 270 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-207ENST00000494090 EXOSC6Q5RKV6 272 aaKnown RBP17.76■□□□□ 0.43
COL27A1-207ENST00000494090 TMEM185AQ8NFB2 350 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 A0A1B0GV50 99 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 TMEM212A6NML5 194 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 HTR5AP47898 357 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 ZNF684Q5T5D7 378 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 OR7E24Q6IFN5 339 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 PTCRAQ6ISU1 281 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-207ENST00000494090 MEX3BQ6ZN04 569 aaKnown RBP17.76■□□□□ 0.43
COL27A1-207ENST00000494090 Q6ZNX1 250 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 TMEM178AQ8NBL3 297 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 PIGCQ92535 297 aa17.76■□□□□ 0.43
COL27A1-207ENST00000494090 C1orf196B1AJZ1 125 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 FPR3P25089 353 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 ERVFC1P60507 584 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 SNRPGP62308 76 aaKnown RBP17.75■□□□□ 0.43
COL27A1-207ENST00000494090 CMIPQ8IY22 773 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 OR52I1Q8NGK6 324 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 TNFRSF13CQ96RJ3 184 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 ZNF223Q9UK11 482 aaPredicted RBP17.75■□□□□ 0.43
COL27A1-207ENST00000494090 TMEM184BQ9Y519 407 aaPredicted RBP17.75■□□□□ 0.43
COL27A1-207ENST00000494090 TRAV36DV7A0A075B6V5 113 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 ADAM23O75077 832 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 F13BP05160 661 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 CATR1Q13166 79 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 SLC36A2Q495M3 483 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 C18orf63Q68DL7 685 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 PLPP6Q8IY26 295 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 OR6V1Q8N148 313 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 HAO2Q9NYQ3 351 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 AKAP11Q9UKA4 1901 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 FAM155AB1AL88 458 aaPredicted RBP17.75■□□□□ 0.43
COL27A1-207ENST00000494090 KDM4EB2RXH2 506 aaPredicted RBP17.75■□□□□ 0.43
COL27A1-207ENST00000494090 HCRTR1O43613 425 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 DPM1O60762 260 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 SLC35E2P0CK97 266 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 RACK1P63244 317 aaKnown RBP17.75■□□□□ 0.43
COL27A1-207ENST00000494090 ZNF529Q6P280 563 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 LINC00299Q6ZSB3 139 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 OR4M1Q8NGD0 313 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 KATNB1Q9BVA0 655 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 SIAEQ9HAT2 523 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 PPP1R14DQ9NXH3 145 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 ANKRD12Q6UB98 2062 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 SNRPBP14678 240 aaKnown RBP17.75■□□□□ 0.43
COL27A1-207ENST00000494090 ZNF136P52737 540 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 OR56B1Q8NGI3 324 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms