RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 SLC25A35Q3KQZ1 300 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 FGD3Q5JSP0 725 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 C1orf185Q5T7R7 199 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 ZNF585AQ6P3V2 769 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 ZNF613Q6PF04 617 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 WFDC3Q8IUB2 231 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 CCDC71Q8IV32 467 aaPredicted RBP10.92□□□□□ -0.66
UPF3A-210ENST00000493727 RPRMLQ8N4K4 120 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 FADS6Q8N9I5 356 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 WDSUB1Q8N9V3 476 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 GPR119Q8TDV5 335 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 ADAMTS16Q8TE57 1224 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 TMEM234Q8WY98 164 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 LRTOMTQ8WZ04 291 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 C1GALT1C1Q96EU7 318 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 SLC41A3Q96GZ6 507 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 GNRHR2Q96P88 292 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 BDH2Q9BUT1 245 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 UCK2Q9BZX2 261 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 CXXC4Q9H2H0 198 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 DCLRE1BQ9H816 532 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 REEP1Q9H902 201 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 RHCGQ9UBD6 479 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 DNAJB9Q9UBS3 223 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 C15orf41Q9Y2V0 281 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 LIPGQ9Y5X9 500 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 MPDZO75970 2070 aa10.92□□□□□ -0.66
UPF3A-210ENST00000493727 A0A087WZY1 265 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 A0A1B0GWA3 101 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 LRRC3CA6NJW4 275 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 TNFRSF11BO00300 401 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 FAAHO00519 579 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 TPST2O60704 377 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 CBR3O75828 277 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 TRAPPC6AO75865 159 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 GADD45GO95257 159 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 WNT11O96014 354 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 ANPEPP15144 967 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 HK1P19367 917 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 DPP4P27487 766 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 DNAJA1P31689 397 aaKnown RBP10.91□□□□□ -0.66
UPF3A-210ENST00000493727 DSCR4P56555 118 aaPredicted RBP10.91□□□□□ -0.66
UPF3A-210ENST00000493727 SESN3P58005 492 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 ST3GAL3Q11203 375 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 TRAM2Q15035 370 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 TOMM34Q15785 309 aaPredicted RBP10.91□□□□□ -0.66
UPF3A-210ENST00000493727 ALG10BQ5I7T1 473 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 RAET1LQ5VY80 246 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 POMZP3Q6PJE2 187 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 ARSKQ6UWY0 536 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 AMIGO2Q86SJ2 522 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 OFCC1Q8IZS5 231 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 PQLC1Q8N2U9 271 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 ICA1LQ8NDH6 482 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 PIK3C3Q8NEB9 887 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 OR52J3Q8NH60 311 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 DNAJA4Q8WW22 397 aaPredicted RBP10.91□□□□□ -0.66
UPF3A-210ENST00000493727 ST8SIA1Q92185 356 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 LRRC46Q96FV0 321 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 PKP2Q99959 881 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 SEMA6AQ9H2E6 1030 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 ZNF703Q9H7S9 590 aaPredicted RBP10.91□□□□□ -0.66
UPF3A-210ENST00000493727 ACKR4Q9NPB9 350 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 MED17Q9NVC6 651 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 C6orf203Q9P0P8 240 aaPredicted RBP10.91□□□□□ -0.66
UPF3A-210ENST00000493727 RIMS3Q9UJD0 308 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 TMCC3Q9ULS5 477 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 SLC7A7Q9UM01 511 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 A4GNTQ9UNA3 340 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 SAMHD1Q9Y3Z3 626 aaKnown RBP10.91□□□□□ -0.66
UPF3A-210ENST00000493727 FAM215AQ9Y5M1 114 aa10.91□□□□□ -0.66
UPF3A-210ENST00000493727 A0A0B4J2E0 115 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 A0A1B0GX12 115 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 CHP2O43745 196 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 MGRN1O60291 552 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 ATP6V1G2O95670 118 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 GLI4P10075 376 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 THRBP10828 461 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 CD99P14209 185 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 SRD5A2P31213 254 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 SLC1A3P43003 542 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 HTR3AP46098 478 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 POLR2HP52434 150 aaKnown RBP10.9□□□□□ -0.66
UPF3A-210ENST00000493727 ARHGDIAP52565 204 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 MERTKQ12866 999 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 FOXF1Q12946 379 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 MYBPHQ13203 477 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 SF3B4Q15427 424 aaKnown RBP eCLIP10.9□□□□□ -0.662e-10■■■■■ 27.3
UPF3A-210ENST00000493727 PLPPR5Q32ZL2 321 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 XP32Q5T750 250 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 RIPPLY2Q5TAB7 128 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 ULK3Q6PHR2 472 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 GRINAQ7Z429 371 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 TSEN54Q7Z6J9 526 aaKnown RBP10.9□□□□□ -0.66
UPF3A-210ENST00000493727 TMEM200AQ86VY9 491 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 LSMEM1Q8N8F7 131 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 OR14L1PQ8NHC6 308 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 NRGNQ92686 78 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 SLC38A4Q969I6 547 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 ZBTB8AQ96BR9 441 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms