RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ZCCHC23Q6ZST2 131 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 CREB3L2Q70SY1 520 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 PEG10Q86TG7 708 aaKnown RBP11.4□□□□□ -0.58
USF1-206ENST00000491629 GPAT4Q86UL3 456 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 ANKRD46Q86W74 232 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 C3orf56Q8N813 242 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 FAM169BQ8N8A8 192 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 ANKFN1Q8N957 763 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 FAM216AQ8WUB2 273 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 CKAP2Q8WWK9 683 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 PMM1Q92871 262 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 ZMYND19Q96E35 227 aaPredicted RBP11.4□□□□□ -0.58
USF1-206ENST00000491629 PRPF18Q99633 342 aaKnown RBP11.4□□□□□ -0.58
USF1-206ENST00000491629 SLC38A1Q9H2H9 487 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 TPK1Q9H3S4 243 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 LPAR2Q9HBW0 351 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.4□□□□□ -0.58
USF1-206ENST00000491629 HIF1ANQ9NWT6 349 aa11.4□□□□□ -0.58
USF1-206ENST00000491629 V9GYY5 206 aaPredicted RBP11.4□□□□□ -0.58
USF1-206ENST00000491629 FAAHO00519 579 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 RNASET2O00584 256 aaKnown RBP11.39□□□□□ -0.59
USF1-206ENST00000491629 ZNF432O94892 652 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 HPXP02790 462 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 CHRM4P08173 479 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 CBR1P16152 277 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 RPS4Y1P22090 263 aaKnown RBP11.39□□□□□ -0.59
USF1-206ENST00000491629 HILS1P60008 231 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 UBE2NP61088 152 aaKnown RBP11.39□□□□□ -0.59
USF1-206ENST00000491629 IL1RL1Q01638 556 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 EPS8Q12929 822 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 MAPK11Q15759 364 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 THSD4Q6ZMP0 1018 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 GLCCI1Q86VQ1 547 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 GSPT2Q8IYD1 628 aaKnown RBP11.39□□□□□ -0.59
USF1-206ENST00000491629 OR8J2Q8NGG1 315 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 OR4A15Q8NGL6 344 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 EPS8L3Q8TE67 593 aaKnown RBP11.39□□□□□ -0.59
USF1-206ENST00000491629 TMEM186Q96B77 213 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 PIF1Q9H611 641 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 NARFLQ9H6Q4 476 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 SLC17A7Q9P2U7 560 aa11.39□□□□□ -0.59
USF1-206ENST00000491629 AGAP5A6NIR3 686 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 OR6C65A6NJZ3 312 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 NPIPB7O75200 414 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 GPIP06744 558 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 GKN3PP0CG01 181 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 UQCRC2P22695 453 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 ACAA2P42765 397 aaKnown RBP11.38□□□□□ -0.59
USF1-206ENST00000491629 GTF2A1P52655 376 aaPredicted RBP11.38□□□□□ -0.59
USF1-206ENST00000491629 LMO4P61968 165 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 ARF1P84077 181 aaKnown RBP11.38□□□□□ -0.59
USF1-206ENST00000491629 ROR2Q01974 943 aaKnown RBP11.38□□□□□ -0.59
USF1-206ENST00000491629 GPAT3Q53EU6 434 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 MRPL2Q5T653 305 aaKnown RBP11.38□□□□□ -0.59
USF1-206ENST00000491629 ATAD3BQ5T9A4 648 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 NIPAL3Q6P499 406 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 ABHD12BQ7Z5M8 362 aaPredicted RBP11.38□□□□□ -0.59
USF1-206ENST00000491629 KDM8Q8N371 416 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 GOLGA6L1Q8N7Z2 621 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 GCDHQ92947 438 aaPredicted RBP11.38□□□□□ -0.59
USF1-206ENST00000491629 YIPF5Q969M3 257 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 NEURL3Q96EH8 262 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 ZNF75AQ96N20 296 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 ZNF317Q96PQ6 595 aaPredicted RBP11.38□□□□□ -0.59
USF1-206ENST00000491629 MRPL37Q9BZE1 423 aaKnown RBP11.38□□□□□ -0.59
USF1-206ENST00000491629 LINC00470Q9BZP3 86 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 NOX3Q9HBY0 568 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 ESM1Q9NQ30 184 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 RLIMQ9NVW2 624 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 ADPRHL2Q9NX46 363 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 ASIC5Q9NY37 505 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 TREM2Q9NZC2 230 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 PCDHB14Q9Y5E9 798 aa11.38□□□□□ -0.59
USF1-206ENST00000491629 SMIM23A6NLE4 172 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 FTCDNL1E5RQL4 147 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 RPL36A-HNRNPH2H7BZ11 118 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 FRS3O43559 492 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 KRT33AO76009 404 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 NCR1O76036 304 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 CPSF4O95639 269 aaKnown RBP11.37□□□□□ -0.59
USF1-206ENST00000491629 MAP2K6P52564 334 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 SEC24CP53992 1094 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 POU3F1Q03052 451 aaPredicted RBP11.37□□□□□ -0.59
USF1-206ENST00000491629 EMX2Q04743 252 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 SNTB2Q13425 540 aaKnown RBP11.37□□□□□ -0.59
USF1-206ENST00000491629 CASP8Q14790 479 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 AWAT1Q58HT5 328 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 PRR31Q5SQ13 230 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 TMEM225Q6GV28 225 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 KRT80Q6KB66 452 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 USP43Q70EL4 1123 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 MDP1Q86V88 176 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 LRP11Q86VZ4 500 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 CMIPQ8IY22 773 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 TUBGCP3Q96CW5 907 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 C16orf45Q96MC5 204 aaPredicted RBP11.37□□□□□ -0.59
USF1-206ENST00000491629 ANKRD27Q96NW4 1050 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 LRRC37BQ96QE4 947 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 GPR35Q9HC97 309 aa11.37□□□□□ -0.59
USF1-206ENST00000491629 DYNLRB1Q9NP97 96 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms