RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 OPRL1P41146 370 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 RPS9P46781 194 aaKnown RBP4.29□□□□□ -1.72
RTN4-215ENST00000491592 NPY2RP49146 381 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 KCNK10P57789 538 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 SNRPEP62304 92 aaKnown RBP4.29□□□□□ -1.72
RTN4-215ENST00000491592 ADARB1P78563 741 aaKnown RBP4.29□□□□□ -1.72
RTN4-215ENST00000491592 IRF8Q02556 426 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 MBTD1Q05BQ5 628 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 SLC3A1Q07837 685 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 TSPAN31Q12999 210 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 SELENBP1Q13228 472 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 FASTKQ14296 549 aaKnown RBP4.29□□□□□ -1.72
RTN4-215ENST00000491592 ODF4Q2M2E3 257 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 CTU2Q2VPK5 515 aaKnown RBP4.29□□□□□ -1.72
RTN4-215ENST00000491592 SYTL3Q4VX76 610 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 RNLSQ5VYX0 342 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 TMEM268Q5VZI3 342 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 REP15Q6BDI9 236 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 LRRC8EQ6NSJ5 796 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 C8orf82Q6P1X6 216 aaPredicted RBP4.29□□□□□ -1.72
RTN4-215ENST00000491592 BTNL8Q6UX41 500 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 CLEC18BQ6UXF7 455 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 PID1Q7Z2X4 250 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 LHFPL4Q7Z7J7 247 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 CCDC190Q86UF4 302 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 DCUN1D3Q8IWE4 304 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 PELI3Q8N2H9 469 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 ELMOD1Q8N336 334 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 CBR4Q8N4T8 237 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 CLEC18CQ8NCF0 446 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 ZNF248Q8NDW4 579 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 PHF10Q8WUB8 498 aaKnown RBP4.29□□□□□ -1.72
RTN4-215ENST00000491592 CANT1Q8WVQ1 401 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 CYGBQ8WWM9 190 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 NRGNQ92686 78 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 SMARCD2Q92925 531 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 LHX4Q969G2 390 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 GLYATL1Q969I3 302 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 FBXL8Q96CD0 374 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 AURKBQ96GD4 344 aaPredicted RBP4.29□□□□□ -1.72
RTN4-215ENST00000491592 GPR137Q96N19 417 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 ZNF578Q96N58 590 aaPredicted RBP4.29□□□□□ -1.72
RTN4-215ENST00000491592 GUCD1Q96NT3 240 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 PAPOLGQ9BWT3 736 aaKnown RBP4.29□□□□□ -1.72
RTN4-215ENST00000491592 C1QTNF7Q9BXJ2 289 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 SLC29A3Q9BZD2 475 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 SLC39A8Q9C0K1 460 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 TMEM39BQ9GZU3 492 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 SLC38A1Q9H2H9 487 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 PIGMQ9H3S5 423 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 DPEP3Q9H4B8 488 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 ARMC7Q9H6L4 198 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 WDR55Q9H6Y2 383 aaPredicted RBP4.29□□□□□ -1.72
RTN4-215ENST00000491592 TBC1D17Q9HA65 648 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 MYNNQ9NPC7 610 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 ABCB10Q9NRK6 738 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 MRPL17Q9NRX2 175 aaKnown RBP4.29□□□□□ -1.72
RTN4-215ENST00000491592 ELOVL5Q9NYP7 299 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 BFARQ9NZS9 450 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 ABCD2Q9UBJ2 740 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 P2RX2Q9UBL9 471 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 AP3M1Q9Y2T2 418 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 LRP12Q9Y561 859 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 HS3ST3B1Q9Y662 390 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 LRRC37AA6NMS7 1700 aa4.29□□□□□ -1.72
RTN4-215ENST00000491592 DOCK5Q9H7D0 1870 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 MYO18AQ92614 2054 aaKnown RBP4.28□□□□□ -1.72
RTN4-215ENST00000491592 MN1Q10571 1320 aaPredicted RBP4.28□□□□□ -1.72
RTN4-215ENST00000491592 LY6G6EA0A0G2JKS1 128 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 A0A1B0GW15 77 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 TMEM213A2RRL7 107 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 PRORSD1PA6NEY8 169 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 PRAMEF26H0Y7S4 382 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 RNASEK-C17orf49H0YIS7 233 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 TEX46H3BTG2 121 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 M0R3G1 203 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 P2RY10O00398 339 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 RAB29O14966 203 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 TOX3O15405 576 aaPredicted RBP4.28□□□□□ -1.72
RTN4-215ENST00000491592 SCO2O43819 266 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 FADS2O95864 444 aaKnown RBP4.28□□□□□ -1.72
RTN4-215ENST00000491592 HPRP00739 348 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 RPN2P04844 631 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 FABP1P07148 127 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 CD3GP09693 182 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 CTXN2P0C2S0 81 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 OR4E1P0C645 316 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 OR2T7P0C7T2 308 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 GFAPP14136 432 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 GP9P14770 177 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 CPN1P15169 458 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 STOMP27105 288 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 ARL2P36404 184 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 SLC1A2P43004 574 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 OR3A1P47881 315 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 UQCRFS1P47985 274 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 GLUD2P49448 558 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 ACOT2P49753 483 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 CSRP3P50461 194 aa4.28□□□□□ -1.72
RTN4-215ENST00000491592 PSMD4P55036 377 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms