RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 SLC25A3Q00325 362 aa17.25■□□□□ 0.35
SREBF1-216ENST00000490796 MAPK11Q15759 364 aa17.25■□□□□ 0.35
SREBF1-216ENST00000490796 CLIP4Q8N3C7 705 aa17.25■□□□□ 0.35
SREBF1-216ENST00000490796 ZIC4Q8N9L1 334 aa17.25■□□□□ 0.35
SREBF1-216ENST00000490796 SPATA3Q8NHX4 192 aa17.25■□□□□ 0.35
SREBF1-216ENST00000490796 SLC25A36Q96CQ1 311 aa17.25■□□□□ 0.35
SREBF1-216ENST00000490796 FBXO17Q96EF6 278 aa17.25■□□□□ 0.35
SREBF1-216ENST00000490796 MAELQ96JY0 434 aaKnown RBP17.25■□□□□ 0.35
SREBF1-216ENST00000490796 TNFRSF13CQ96RJ3 184 aa17.25■□□□□ 0.35
SREBF1-216ENST00000490796 SDR39U1Q9NRG7 319 aaPredicted RBP17.25■□□□□ 0.35
SREBF1-216ENST00000490796 MOKQ9UQ07 419 aa17.25■□□□□ 0.35
SREBF1-216ENST00000490796 STAB1Q9NY15 2570 aa17.24■□□□□ 0.35
SREBF1-216ENST00000490796 FRS3O43559 492 aa17.24■□□□□ 0.35
SREBF1-216ENST00000490796 PRG2P13727 222 aa17.24■□□□□ 0.35
SREBF1-216ENST00000490796 PAX7P23759 505 aa17.24■□□□□ 0.35
SREBF1-216ENST00000490796 EFNA4P52798 201 aa17.24■□□□□ 0.35
SREBF1-216ENST00000490796 STX1BP61266 288 aa17.24■□□□□ 0.35
SREBF1-216ENST00000490796 MAGOHP61326 146 aaKnown RBP17.24■□□□□ 0.35
SREBF1-216ENST00000490796 TMEM249Q2WGJ8 235 aa17.24■□□□□ 0.35
SREBF1-216ENST00000490796 GTDC1Q4AE62 458 aa17.24■□□□□ 0.35
SREBF1-216ENST00000490796 NIPAL3Q6P499 406 aa17.24■□□□□ 0.35
SREBF1-216ENST00000490796 SERPINA11Q86U17 422 aa17.24■□□□□ 0.35
SREBF1-216ENST00000490796 STK35Q8TDR2 534 aa17.24■□□□□ 0.35
SREBF1-216ENST00000490796 VPS33AQ96AX1 596 aa17.24■□□□□ 0.35
SREBF1-216ENST00000490796 FKBP7Q9Y680 259 aa17.24■□□□□ 0.35
SREBF1-216ENST00000490796 ELOA3DA6NLF2 546 aaPredicted RBP17.23■□□□□ 0.35
SREBF1-216ENST00000490796 LGI1O95970 557 aa17.23■□□□□ 0.35
SREBF1-216ENST00000490796 CRYAAP02489 173 aa17.23■□□□□ 0.35
SREBF1-216ENST00000490796 SELENOPP49908 381 aa17.23■□□□□ 0.35
SREBF1-216ENST00000490796 SLC18A1P54219 525 aa17.23■□□□□ 0.35
SREBF1-216ENST00000490796 SNRPD2P62316 118 aaKnown RBP17.23■□□□□ 0.35
SREBF1-216ENST00000490796 LOXL1Q08397 574 aaPredicted RBP17.23■□□□□ 0.35
SREBF1-216ENST00000490796 ELOA3BQ3SY89 546 aa17.23■□□□□ 0.35
SREBF1-216ENST00000490796 TBRG1Q3YBR2 411 aa17.23■□□□□ 0.35
SREBF1-216ENST00000490796 CREB3L2Q70SY1 520 aa17.23■□□□□ 0.35
SREBF1-216ENST00000490796 ELOA3Q8NG57 546 aa17.23■□□□□ 0.35
SREBF1-216ENST00000490796 OR9I1Q8NGQ6 314 aa17.23■□□□□ 0.35
SREBF1-216ENST00000490796 OR1K1Q8NGR3 316 aa17.23■□□□□ 0.35
SREBF1-216ENST00000490796 BBS10Q8TAM1 723 aa17.23■□□□□ 0.35
SREBF1-216ENST00000490796 C3orf49Q96BT1 292 aa17.23■□□□□ 0.35
SREBF1-216ENST00000490796 ALKBH3Q96Q83 286 aaPredicted RBP17.23■□□□□ 0.35
SREBF1-216ENST00000490796 SLC38A2Q96QD8 506 aa17.23■□□□□ 0.35
SREBF1-216ENST00000490796 OR52B2Q96RD2 323 aa17.23■□□□□ 0.35
SREBF1-216ENST00000490796 KCNK17Q96T54 332 aa17.23■□□□□ 0.35
SREBF1-216ENST00000490796 RNF212BA8MTL3 300 aa17.22■□□□□ 0.35
SREBF1-216ENST00000490796 CLIC1O00299 241 aa17.22■□□□□ 0.35
SREBF1-216ENST00000490796 ZNF43P17038 809 aa17.22■□□□□ 0.35
SREBF1-216ENST00000490796 IL1RL1Q01638 556 aa17.22■□□□□ 0.35
SREBF1-216ENST00000490796 C1DQ13901 141 aaKnown RBP17.22■□□□□ 0.35
SREBF1-216ENST00000490796 RGNQ15493 299 aa17.22■□□□□ 0.35
SREBF1-216ENST00000490796 C6orf52Q5T4I8 152 aa17.22■□□□□ 0.35
SREBF1-216ENST00000490796 MFSD8Q8NHS3 518 aa17.22■□□□□ 0.35
SREBF1-216ENST00000490796 PROX1Q92786 737 aa17.22■□□□□ 0.35
SREBF1-216ENST00000490796 REPIN1Q9BWE0 567 aaKnown RBP17.22■□□□□ 0.35
SREBF1-216ENST00000490796 MOV10Q9HCE1 1003 aaKnown RBP17.22■□□□□ 0.35
SREBF1-216ENST00000490796 CDC42EP3Q9UKI2 254 aa17.22■□□□□ 0.35
SREBF1-216ENST00000490796 ZNF500O60304 480 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-216ENST00000490796 ERLIN1O75477 346 aa17.21■□□□□ 0.35
SREBF1-216ENST00000490796 F12P00748 615 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-216ENST00000490796 RPS5P46782 204 aaKnown RBP17.21■□□□□ 0.35
SREBF1-216ENST00000490796 PDLIM4P50479 330 aa17.21■□□□□ 0.35
SREBF1-216ENST00000490796 VLDLRP98155 873 aa17.21■□□□□ 0.35
SREBF1-216ENST00000490796 FADDQ13158 208 aa17.21■□□□□ 0.35
SREBF1-216ENST00000490796 CARTPTQ16568 116 aa17.21■□□□□ 0.35
SREBF1-216ENST00000490796 CYB5R2Q6BCY4 276 aa17.21■□□□□ 0.35
SREBF1-216ENST00000490796 SLC46A3Q7Z3Q1 461 aa17.21■□□□□ 0.35
SREBF1-216ENST00000490796 GOLGA6L1Q8N7Z2 621 aa17.21■□□□□ 0.35
SREBF1-216ENST00000490796 C10orf105Q8TEF2 133 aa17.21■□□□□ 0.35
SREBF1-216ENST00000490796 SLC35B4Q969S0 331 aa17.21■□□□□ 0.35
SREBF1-216ENST00000490796 ZNF317Q96PQ6 595 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-216ENST00000490796 KATNB1Q9BVA0 655 aa17.21■□□□□ 0.35
SREBF1-216ENST00000490796 BCL2L10Q9HD36 194 aa17.21■□□□□ 0.35
SREBF1-216ENST00000490796 A4GALTQ9NPC4 353 aa17.21■□□□□ 0.35
SREBF1-216ENST00000490796 PCDHB14Q9Y5E9 798 aa17.21■□□□□ 0.35
SREBF1-216ENST00000490796 MXRA5Q9NR99 2828 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 A0A096LPE4 126 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 IGHV1-18A0A0C4DH31 117 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 A0A1W2PPZ6 126 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 VSTM5A8MXK1 200 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 TMEM229AB2RXF0 380 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 POLR3GO15318 223 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-216ENST00000490796 SLC43A1O75387 559 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 NUDT7P0C024 238 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 PNMTP11086 282 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 USF1P22415 310 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-216ENST00000490796 SERPINF1P36955 418 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 P2RY4P51582 365 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 SH3BGRP55822 239 aaPredicted RBP17.2■□□□□ 0.34
SREBF1-216ENST00000490796 CLDN17P56750 224 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 HOXC5Q00444 222 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 ROR2Q01974 943 aaKnown RBP17.2■□□□□ 0.34
SREBF1-216ENST00000490796 LGALS3BPQ08380 585 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 ANKRD16Q6P6B7 361 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 SLC2A7Q6PXP3 512 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 MAVSQ7Z434 540 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 EPHX4Q8IUS5 362 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 KDM8Q8N371 416 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 RNF217Q8TC41 542 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 GTF2H4Q92759 462 aa17.2■□□□□ 0.34
SREBF1-216ENST00000490796 MAL2Q969L2 176 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms