RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 DHRS4L2Q6PKH6 230 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 TMEM108Q6UXF1 575 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 NHLRC1Q6VVB1 395 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 CREB3L2Q70SY1 520 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 COMTD1Q86VU5 262 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 EPHX4Q8IUS5 362 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 OR9K2Q8NGE7 335 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 OR52E4Q8NGH9 312 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 MFSD8Q8NHS3 518 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 BBS10Q8TAM1 723 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 MAL2Q969L2 176 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 SPDL1Q96EA4 605 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 DNAJA3Q96EY1 480 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 ZNF385AQ96PM9 386 aaKnown RBP8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 PTDSS2Q9BVG9 487 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 ZNF385DQ9H6B1 395 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 TMEM38AQ9H6F2 299 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 ARMC7Q9H6L4 198 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 SLC17A5Q9NRA2 495 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 CISD1Q9NZ45 108 aaKnown RBP8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 VAPAQ9P0L0 249 aa8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 MAGED1Q9Y5V3 778 aaPredicted RBP8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 SONP18583 2426 aaKnown RBP8.53□□□□□ -1.04
TMEM39A-210ENST00000490099 A0A1W2PP18 115 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 CIB4A0PJX0 185 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 ABCD4O14678 606 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 FRS3O43559 492 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 SHOX2O60902 331 aaPredicted RBP8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 RAD51DO75771 328 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 ZNF432O94892 652 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 VIMP08670 466 aaKnown RBP8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 PPIBP23284 216 aaKnown RBP8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 AQP5P55064 265 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 COPZ1P61923 177 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 TGFBR3Q03167 851 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 BNIP2Q12982 314 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 TNK1Q13470 666 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 OR7A5Q15622 319 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 STK11Q15831 433 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 ZNF311Q5JNZ3 666 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 C1orf140Q5VVS0 124 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 REEP3Q6NUK4 255 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 Q71RC1 249 aaPredicted RBP8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 AAED1Q7RTV5 226 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 UBE2J2Q8N2K1 259 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 DPP10Q8N608 796 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 POMGNT2Q8NAT1 580 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 OR52N5Q8NH56 324 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 TSPEARQ8WU66 669 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 TRMT61AQ96FX7 289 aaKnown RBP8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 ZNF317Q96PQ6 595 aaPredicted RBP8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 DHRS9Q9BPW9 319 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 SIKE1Q9BRV8 207 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 SLCO5A1Q9H2Y9 848 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 HEATR1Q9H583 2144 aaKnown RBP8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 IKZF5Q9H5V7 419 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 CCDC167Q9P0B6 97 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 RASD1Q9Y272 281 aa8.52□□□□□ -1.05
TMEM39A-210ENST00000490099 IGKV1D-42A0A075B6H8 117 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 GMNCA6NCL1 334 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 TMEM247A6NEH6 219 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 OR6C65A6NJZ3 312 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 CCT8L1PA6NM43 557 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 RPL36A-HNRNPH2H7BZ11 118 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 TPST1O60507 370 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 TPST2O60704 377 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 IGHV4-39P01824 125 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 TROVE2P10155 538 aaKnown RBP eCLIP8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 PAX7P23759 505 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 HTR2AP28223 471 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 TTKP33981 857 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 PCBP3P57721 371 aaKnown RBP8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 STX1BP61266 288 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 SLC25A3Q00325 362 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 CDK6Q00534 326 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 SQLEQ14534 574 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 CLEC12BQ2HXU8 276 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 RUNDC3AQ59EK9 446 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 GCNT6Q5T4J0 391 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 TMEM225Q6GV28 225 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 KLHL17Q6TDP4 642 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 C5orf46Q6UWT4 87 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 CASP12Q6UXS9 341 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 B3GLCTQ6Y288 498 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 LINGO2Q7L985 606 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 NET1Q7Z628 596 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 CPLX4Q7Z7G2 160 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 CADM2Q8N3J6 435 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 FAM169BQ8N8A8 192 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 OR6S1Q8NH40 331 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 MAGEE2Q8TD90 523 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 BCL2L2Q92843 193 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 GTPBP3Q969Y2 492 aaKnown RBP8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 KTI12Q96EK9 354 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 SLC41A3Q96GZ6 507 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 CPPED1Q9BRF8 314 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 LINC00470Q9BZP3 86 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 OBP2BQ9NPH6 170 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 FAIMQ9NVQ4 179 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 B3GAT1Q9P2W7 334 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms