RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 KBTBD8Q8NFY9 601 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 OR10A6Q8NH74 314 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 MFSD8Q8NHS3 518 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 ZNF385AQ96PM9 386 aaKnown RBP11.36□□□□□ -0.59
CHMP3-208ENST00000486404 TMEM204Q9BSN7 226 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 PIF1Q9H611 641 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 KAT8Q9H7Z6 458 aaKnown RBP11.36□□□□□ -0.59
CHMP3-208ENST00000486404 KLHL14Q9P2G3 628 aa11.36□□□□□ -0.59
CHMP3-208ENST00000486404 TRAV36DV7A0A075B6V5 113 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 A0A0B4J2E0 115 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 A0A1B0GX12 115 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 FBP2O00757 339 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 AKAP8O43823 692 aaKnown RBP11.35□□□□□ -0.59
CHMP3-208ENST00000486404 NPIPB7O75200 414 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 MFN2O95140 757 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 ITGA5P08648 1049 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 NQO1P15559 274 aaKnown RBP11.35□□□□□ -0.59
CHMP3-208ENST00000486404 ZNF43P17038 809 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 CDH2P19022 906 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-208ENST00000486404 ZNF83P51522 516 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 CDH11P55287 796 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 PCBP3P57721 371 aaKnown RBP11.35□□□□□ -0.59
CHMP3-208ENST00000486404 ADAM8P78325 824 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 KLF10Q13118 480 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 C1DQ13901 141 aaKnown RBP11.35□□□□□ -0.59
CHMP3-208ENST00000486404 OR1Q1Q15612 314 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 SWT1Q5T5J6 900 aaKnown RBP11.35□□□□□ -0.59
CHMP3-208ENST00000486404 TSPO2Q5TGU0 170 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 SHEQ5VZ18 495 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 CGB2Q6NT52 195 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 NIPAL3Q6P499 406 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 TMEM108Q6UXF1 575 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 LRRC75A-AS1Q8N1F1 130 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 C17orf78Q8N4C9 275 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 C10orf53Q8N6V4 93 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 ZNF611Q8N823 705 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 PCYOX1LQ8NBM8 494 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 C1orf162Q8NEQ5 155 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-208ENST00000486404 WFDC11Q8NEX6 87 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 OR8J3Q8NGG0 315 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 VANGL1Q8TAA9 524 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-208ENST00000486404 RASSF5Q8WWW0 418 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 KTI12Q96EK9 354 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-208ENST00000486404 ALKBH3Q96Q83 286 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-208ENST00000486404 ECSITQ9BQ95 431 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 PTDSS2Q9BVG9 487 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 ASPNQ9BXN1 380 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 CCDC134Q9H6E4 229 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 SAR1AQ9NR31 198 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 SLC7A10Q9NS82 523 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 GID8Q9NWU2 228 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 POU2F3Q9UKI9 436 aa11.35□□□□□ -0.59
CHMP3-208ENST00000486404 A0A1W2PR80 420 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 OR6C65A6NJZ3 312 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 FTCDNL1E5RQL4 147 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 M0R082 166 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 M0R1B8 84 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 ABCD4O14678 606 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 PTNP21246 168 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 MPGP29372 298 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 GRPRP30550 384 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 MDH1P40925 334 aaKnown RBP11.34□□□□□ -0.59
CHMP3-208ENST00000486404 RPS4XP62701 263 aaKnown RBP11.34□□□□□ -0.59
CHMP3-208ENST00000486404 EGR4Q05215 589 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 MFSD13AQ14CX5 517 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 VMACQ2NL98 169 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 RABL3Q5HYI8 236 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 NANOGP8Q6NSW7 305 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 SEZ6L2Q6UXD5 910 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 ZNF417Q8TAU3 575 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 PROX1Q92786 737 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 GTPBP3Q969Y2 492 aaKnown RBP11.34□□□□□ -0.59
CHMP3-208ENST00000486404 LRRC58Q96CX6 371 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 ZNF587Q96SQ5 575 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-208ENST00000486404 MCHR1Q99705 422 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 ARHGDIGQ99819 225 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 TMUB1Q9BVT8 246 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 PRR14Q9BWN1 585 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 ALG2Q9H553 416 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 NANOGQ9H9S0 305 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 FAIMQ9NVQ4 179 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 AMDHD2Q9Y303 409 aa11.34□□□□□ -0.59
CHMP3-208ENST00000486404 MAGED1Q9Y5V3 778 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-208ENST00000486404 CADP27708 2225 aa11.33□□□□□ -0.59
CHMP3-208ENST00000486404 HEATR1Q9H583 2144 aaKnown RBP11.33□□□□□ -0.6
CHMP3-208ENST00000486404 C2CD3Q4AC94 2353 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 IGKV1D-42A0A075B6H8 117 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 A0A087WUJ7 227 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 CPSF4LA6NMK7 179 aaKnown RBP11.33□□□□□ -0.6
CHMP3-208ENST00000486404 M0QX08 132 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 FXYD1O00168 92 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 SLC22A2O15244 555 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 FMO6PO60774 539 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 TMCC2O75069 709 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 WNT11O96014 354 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 NPPAP01160 153 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 C8BP07358 591 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 CD247P20963 164 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 CBLP22681 906 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 NTF4P34130 210 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms