RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 AURKBQ96GD4 344 aaPredicted RBP17.04■□□□□ 0.32
R3HDM1-215ENST00000483021 ZNF317Q96PQ6 595 aaPredicted RBP17.04■□□□□ 0.32
R3HDM1-215ENST00000483021 TNFRSF13CQ96RJ3 184 aa17.04■□□□□ 0.32
R3HDM1-215ENST00000483021 RAD21L1Q9H4I0 556 aa17.04■□□□□ 0.32
R3HDM1-215ENST00000483021 MANSC1Q9H8J5 431 aa17.04■□□□□ 0.32
R3HDM1-215ENST00000483021 TMEM45AQ9NWC5 275 aa17.04■□□□□ 0.32
R3HDM1-215ENST00000483021 RASD1Q9Y272 281 aa17.04■□□□□ 0.32
R3HDM1-215ENST00000483021 CUBNO60494 3623 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 TMEM229AB2RXF0 380 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 ATP6V1G2-DDX39BF2Z307 99 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 ZNF500O60304 480 aaPredicted RBP17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 NPIPB7O75200 414 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 AHSA1O95433 338 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 CDH2P19022 906 aaPredicted RBP17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 P2RY4P51582 365 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 EFNA4P52798 201 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 BNIP2Q12982 314 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 FADDQ13158 208 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 TMEM249Q2WGJ8 235 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 CHRFAM7AQ494W8 412 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 GTDC1Q4AE62 458 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 C6orf52Q5T4I8 152 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 HMBOX1Q6NT76 420 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 CREB3L2Q70SY1 520 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 MIER2Q8N344 545 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 CLIP4Q8N3C7 705 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 C3orf49Q96BT1 292 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 KCNS3Q9BQ31 491 aa17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 MOV10Q9HCE1 1003 aaKnown RBP17.03■□□□□ 0.32
R3HDM1-215ENST00000483021 PRG2P13727 222 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 GTF2E2P29084 291 aaKnown RBP17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 VLDLRP98155 873 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 TBRG1Q3YBR2 411 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 HIKESHIQ53FT3 197 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 ZNF311Q5JNZ3 666 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 MAVSQ7Z434 540 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 SERPINA11Q86U17 422 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 LSRQ86X29 649 aaPredicted RBP17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 OR9I1Q8NGQ6 314 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 OR1K1Q8NGR3 316 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 MFSD8Q8NHS3 518 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 BBS10Q8TAM1 723 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 HTRA1Q92743 480 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 VPS33AQ96AX1 596 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 ALKBH3Q96Q83 286 aaPredicted RBP17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 BCL2L10Q9HD36 194 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 A4GALTQ9NPC4 353 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 MOKQ9UQ07 419 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 CHST2Q9Y4C5 530 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 FKBP7Q9Y680 259 aa17.02■□□□□ 0.32
R3HDM1-215ENST00000483021 KLF11O14901 512 aa17.01■□□□□ 0.31
R3HDM1-215ENST00000483021 GPRIN2O60269 458 aa17.01■□□□□ 0.31
R3HDM1-215ENST00000483021 SELENOPP49908 381 aa17.01■□□□□ 0.31
R3HDM1-215ENST00000483021 SH3BGRP55822 239 aaPredicted RBP17.01■□□□□ 0.31
R3HDM1-215ENST00000483021 UBE2NP61088 152 aaKnown RBP17.01■□□□□ 0.31
R3HDM1-215ENST00000483021 MAGOHP61326 146 aaKnown RBP17.01■□□□□ 0.31
R3HDM1-215ENST00000483021 RGNQ15493 299 aa17.01■□□□□ 0.31
R3HDM1-215ENST00000483021 NIPAL3Q6P499 406 aa17.01■□□□□ 0.31
R3HDM1-215ENST00000483021 C10orf105Q8TEF2 133 aa17.01■□□□□ 0.31
R3HDM1-215ENST00000483021 GTF2H4Q92759 462 aa17.01■□□□□ 0.31
R3HDM1-215ENST00000483021 PROX1Q92786 737 aa17.01■□□□□ 0.31
R3HDM1-215ENST00000483021 SLC38A2Q96QD8 506 aa17.01■□□□□ 0.31
R3HDM1-215ENST00000483021 OR52B2Q96RD2 323 aa17.01■□□□□ 0.31
R3HDM1-215ENST00000483021 KATNB1Q9BVA0 655 aa17.01■□□□□ 0.31
R3HDM1-215ENST00000483021 LINC00470Q9BZP3 86 aa17.01■□□□□ 0.31
R3HDM1-215ENST00000483021 ARPC4-TTLL3A0A0A6YYG9 625 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 CLIC1O00299 241 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 LGI1O95970 557 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 CRYAAP02489 173 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 BMP2P12643 396 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 STX1BP61266 288 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 SNRPD2P62316 118 aaKnown RBP17■□□□□ 0.31
R3HDM1-215ENST00000483021 SWI5Q1ZZU3 235 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 C3orf36Q3SXR2 165 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 C5orf46Q6UWT4 87 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 EPHX4Q8IUS5 362 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 GOLGA6L1Q8N7Z2 621 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 MAGEE2Q8TD90 523 aaPredicted RBP17■□□□□ 0.31
R3HDM1-215ENST00000483021 PAIP1Q9H074 479 aaKnown RBP17■□□□□ 0.31
R3HDM1-215ENST00000483021 C12orf10Q9HB07 376 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 RPS6KB2Q9UBS0 482 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 CDC42EP3Q9UKI2 254 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 RCE1Q9Y256 329 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 PCDHB14Q9Y5E9 798 aa17■□□□□ 0.31
R3HDM1-215ENST00000483021 IGHV1-18A0A0C4DH31 117 aa16.99■□□□□ 0.31
R3HDM1-215ENST00000483021 C5orf58C9J3I9 102 aa16.99■□□□□ 0.31
R3HDM1-215ENST00000483021 FTCDNL1E5RQL4 147 aa16.99■□□□□ 0.31
R3HDM1-215ENST00000483021 F12P00748 615 aaPredicted RBP16.99■□□□□ 0.31
R3HDM1-215ENST00000483021 PNMTP11086 282 aa16.99■□□□□ 0.31
R3HDM1-215ENST00000483021 HOXB1P14653 301 aaPredicted RBP16.99■□□□□ 0.31
R3HDM1-215ENST00000483021 ETS2P15036 469 aa16.99■□□□□ 0.31
R3HDM1-215ENST00000483021 MRPL19P49406 292 aaKnown RBP16.99■□□□□ 0.31
R3HDM1-215ENST00000483021 ANKRD16Q6P6B7 361 aa16.99■□□□□ 0.31
R3HDM1-215ENST00000483021 C6orf89Q6UWU4 347 aa16.99■□□□□ 0.31
R3HDM1-215ENST00000483021 ANKK1Q8NFD2 765 aa16.99■□□□□ 0.31
R3HDM1-215ENST00000483021 TLCD1Q96CP7 247 aa16.99■□□□□ 0.31
R3HDM1-215ENST00000483021 FBXO17Q96EF6 278 aa16.99■□□□□ 0.31
R3HDM1-215ENST00000483021 TMEM160Q9NX00 188 aa16.99■□□□□ 0.31
R3HDM1-215ENST00000483021 USH1CQ9Y6N9 552 aa16.99■□□□□ 0.31
R3HDM1-215ENST00000483021 NDUFS8O00217 210 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms