RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 MPP4Q96JB8 637 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 RNF145Q96MT1 663 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 TRIB1Q96RU8 372 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 CPPED1Q9BRF8 314 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-213ENST00000480102 TMEM43Q9BTV4 400 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 ZNF426Q9BUY5 554 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 THUMPD3Q9BV44 507 aaKnown RBP4.36□□□□□ -1.71
PTCD3-213ENST00000480102 TRIM2Q9C040 744 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 AMBRA1Q9C0C7 1298 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 COQ10BQ9H8M1 238 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 SLC6A13Q9NSD5 602 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 PARPBPQ9NWS1 579 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 GID8Q9NWU2 228 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 GALNT8Q9NY28 637 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 CCDC167Q9P0B6 97 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 EMC3Q9P0I2 261 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 VAPAQ9P0L0 249 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 TMEM181Q9P2C4 612 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 MALT1Q9UDY8 824 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 TESQ9UGI8 421 aaKnown RBP4.36□□□□□ -1.71
PTCD3-213ENST00000480102 NDRG3Q9UGV2 375 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 CAMK2AQ9UQM7 478 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 B3GALT5Q9Y2C3 310 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 CARD8Q9Y2G2 431 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 CHST2Q9Y4C5 530 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 CELSR2Q9HCU4 2923 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 TEX15Q9BXT5 2789 aa4.36□□□□□ -1.71
PTCD3-213ENST00000480102 FBN2P35556 2912 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ITPR2Q14571 2701 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 CENPVL1A0A0U1RR11 272 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 TUBAL3A6NHL2 446 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 NPIPB13A6NJU9 1138 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ZNF716A6NP11 495 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 A8MVM7 634 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 CENPBD1B2RD01 187 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 C5orf58C9J3I9 102 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 NPIPB4C9JG80 1138 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 H3BML4 177 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 C16orf97H3BN30 126 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 FXYD1O00168 92 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 EFNA2O43921 213 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 SNX3O60493 162 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 CTAG2O75638 210 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 MFN2O95140 757 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 SYNGR4O95473 234 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 MPIG6BO95866 241 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 LGI1O95970 557 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 MT-ATP6P00846 226 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 GPIP06744 558 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 UBTFL6P0CB48 400 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ETFAP13804 333 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 COX5AP20674 150 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 EFNA1P20827 205 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-213ENST00000480102 BMP5P22003 454 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ENPP1P22413 925 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 AGTR1P30556 359 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 SLC7A1P30825 629 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 SDHAP31040 664 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 RBM34P42696 430 aaKnown RBP4.35□□□□□ -1.71
PTCD3-213ENST00000480102 KIR2DL3P43628 341 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 OR3A2P47893 321 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 KCNJ5P48544 419 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 GZMMP51124 257 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 MNAT1P51948 309 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 NR1H2P55055 460 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 CASP9P55211 416 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 COPZ1P61923 177 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 SLC35A1P78382 337 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 IL13RA1P78552 427 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 TLE4Q04727 773 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 FOXF1Q12946 379 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 TOP3AQ13472 1001 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-213ENST00000480102 TOMM20Q15388 145 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 CDSNQ15517 529 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 GPR68Q15743 365 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 C3orf36Q3SXR2 165 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ANKDD1AQ495B1 522 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 C4orf46Q504U0 113 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 AGKQ53H12 422 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 MRPL2Q5T653 305 aaKnown RBP4.35□□□□□ -1.71
PTCD3-213ENST00000480102 FAM69AQ5T7M9 428 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 OR5M10Q6IEU7 315 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 NANOGP8Q6NSW7 305 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 CGB2Q6NT52 195 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ADAM5Q6NVV9 412 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 TNFAIP8L2Q6P589 184 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ULK3Q6PHR2 472 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 SPNS3Q6ZMD2 512 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 FCRLAQ7L513 359 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ZNF627Q7L945 461 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 GALNT10Q86SR1 603 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 CCDC71Q8IV32 467 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-213ENST00000480102 MCEMP1Q8IX19 187 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 CCDC36Q8IYA8 594 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 GABRG1Q8N1C3 465 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ARHGAP24Q8N264 748 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 C17orf78Q8N4C9 275 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 ZNF610Q8N9Z0 462 aa4.35□□□□□ -1.71
PTCD3-213ENST00000480102 C1orf162Q8NEQ5 155 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-213ENST00000480102 STEAP2Q8NFT2 490 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms