RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 SLC25A24Q6NUK1 477 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 KIAA1328Q86T90 577 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 CLEC4FQ8N1N0 589 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 GMCL1P1Q8NEA9 526 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 OR2T34Q8NGX1 318 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 TRMT10AQ8TBZ6 339 aaKnown RBP2.35□□□□□ -2.03
LTN1-204ENST00000475344 BRSK1Q8TDC3 778 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 HTR3CQ8WXA8 447 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 FRZBQ92765 325 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 AMDHD1Q96NU7 426 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 ZNF670Q9BS34 389 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 GPR61Q9BZJ8 451 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 SELENOIQ9C0D9 397 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 ROGDIQ9GZN7 287 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 POLR1EQ9GZS1 481 aaKnown RBP2.35□□□□□ -2.03
LTN1-204ENST00000475344 RAB33BQ9H082 229 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 CDC42EP4Q9H3Q1 356 aaKnown RBP2.35□□□□□ -2.03
LTN1-204ENST00000475344 RMND5AQ9H871 391 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 PIPOXQ9P0Z9 390 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 PCSK1NQ9UHG2 260 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 CABIN1Q9Y6J0 2220 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 MROH7-TTC4A0A0A0MT08 1334 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 PIKFYVEQ9Y2I7 2098 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 PNPLA6Q8IY17 1366 aa2.35□□□□□ -2.03
LTN1-204ENST00000475344 IGLV2-18A0A075B6J9 118 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 IDSB3KWA1 339 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 E9PBE3 544 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 MAGEB3O15480 346 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 CXCL13O43927 109 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 B4GALT2O60909 372 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 TM7SF2O76062 418 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 C6orf47O95873 294 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 LGI1O95970 557 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 HNF1AP20823 631 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 IMPDH1P20839 514 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 ANXA13P27216 316 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 PSMA5P28066 241 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 P2RY1P47900 373 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 KLF17Q5JT82 389 aaPredicted RBP2.34□□□□□ -2.03
LTN1-204ENST00000475344 TTC23Q5W5X9 447 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 ZSCAN25Q6NSZ9 544 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 CES3Q6UWW8 571 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 TMIGD1Q6UXZ0 262 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 ZNF571Q7Z3V5 609 aaPredicted RBP2.34□□□□□ -2.03
LTN1-204ENST00000475344 CCDC50Q8IVM0 306 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 C12orf56Q8IXR9 622 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 ANKFN1Q8N957 763 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 OR5L2Q8NGL0 311 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 OR1F12Q8NHA8 337 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 CTNNBL1Q8WYA6 563 aaPredicted RBP2.34□□□□□ -2.03
LTN1-204ENST00000475344 EFHD2Q96C19 240 aaPredicted RBP2.34□□□□□ -2.03
LTN1-204ENST00000475344 TIMD4Q96H15 378 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 SEC22AQ96IW7 307 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 LINC00477Q96M19 166 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 ZNF641Q96N77 438 aaPredicted RBP2.34□□□□□ -2.03
LTN1-204ENST00000475344 TGM7Q96PF1 710 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 HIST1H4GQ99525 98 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 DMAP1Q9NPF5 467 aaPredicted RBP2.34□□□□□ -2.03
LTN1-204ENST00000475344 SIGLEC8Q9NYZ4 499 aa2.34□□□□□ -2.03
LTN1-204ENST00000475344 ISY1Q9ULR0 285 aaKnown RBP2.34□□□□□ -2.03
LTN1-204ENST00000475344 MRPS33Q9Y291 106 aaKnown RBP2.34□□□□□ -2.03
LTN1-204ENST00000475344 AK6Q9Y3D8 172 aaKnown RBP2.34□□□□□ -2.03
LTN1-204ENST00000475344 SH3TC1Q8TE82 1336 aa2.34□□□□□ -2.04
LTN1-204ENST00000475344 CLSPNQ9HAW4 1339 aa2.34□□□□□ -2.04
LTN1-204ENST00000475344 TRDCB7Z8K6 153 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 F5H6K3 240 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 RBBP9O75884 186 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 SCGNO76038 276 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 RHOXF2BP0C7M4 288 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 HSMCR30P0CW71 290 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 PNMTP11086 282 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 COX5AP20674 150 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 RFC4P35249 363 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 LEPP41159 167 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 KPNA2P52292 529 aaKnown RBP2.33□□□□□ -2.04
LTN1-204ENST00000475344 TNFRSF17Q02223 184 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 KLRC3Q07444 240 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 ASPHQ12797 758 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 GRB7Q14451 532 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 TRIM16LQ309B1 348 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 SLC25A52Q3SY17 297 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 GGTA1PQ4G0N0 100 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 BOLA3Q53S33 107 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 XKR4Q5GH76 650 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 LY6G6FQ5SQ64 297 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 ATAD3BQ5T9A4 648 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 Q5W150 140 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 GET4Q7L5D6 327 aaPredicted RBP2.33□□□□□ -2.04
LTN1-204ENST00000475344 NLRP9Q7RTR0 991 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 CAMK2N1Q7Z7J9 78 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 NPBQ8NG41 125 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 OR6C4Q8NGE1 309 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 OR4D9Q8NGE8 314 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 OR4D5Q8NGN0 318 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 OR9G1Q8NH87 305 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 UBALD1Q8TB05 177 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 ST8SIA1Q92185 356 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 EMG1Q92979 244 aaKnown RBP2.33□□□□□ -2.04
LTN1-204ENST00000475344 RAB34Q9BZG1 259 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 SLC17A5Q9NRA2 495 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms