RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 CRLF2Q9HC73 371 aa10.67□□□□□ -0.7
TRIM13-207ENST00000474805 EXOSC3Q9NQT5 275 aaKnown RBP10.67□□□□□ -0.7
TRIM13-207ENST00000474805 ZNF275Q9NSD4 429 aaPredicted RBP10.67□□□□□ -0.7
TRIM13-207ENST00000474805 TBK1Q9UHD2 729 aa10.67□□□□□ -0.7
TRIM13-207ENST00000474805 WDR45Q9Y484 360 aa10.67□□□□□ -0.7
TRIM13-207ENST00000474805 PPIAL4AQ9Y536 164 aa10.67□□□□□ -0.7
TRIM13-207ENST00000474805 TMEM229AB2RXF0 380 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 TMEM233B4DJY2 109 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 SYNGR3O43761 229 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 SCN2BO60939 215 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 PEX11AO75192 247 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 GPIP06744 558 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 HOXB1P14653 301 aaPredicted RBP10.66□□□□□ -0.7
TRIM13-207ENST00000474805 MAPK1P28482 360 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 ECHS1P30084 290 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 ALDH3B1P43353 468 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 TMEM33P57088 247 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 ETF1P62495 437 aaKnown RBP10.66□□□□□ -0.7
TRIM13-207ENST00000474805 ARF1P84077 181 aaKnown RBP10.66□□□□□ -0.7
TRIM13-207ENST00000474805 ROR2Q01974 943 aaKnown RBP10.66□□□□□ -0.7
TRIM13-207ENST00000474805 ZNF311Q5JNZ3 666 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 AP1ARQ63HQ0 302 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 FRRS1Q6ZNA5 592 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 C1QL2Q7Z5L3 287 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 EPHX4Q8IUS5 362 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 CLECL1Q8IZS7 167 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 RIBC1Q8N443 379 aaPredicted RBP10.66□□□□□ -0.7
TRIM13-207ENST00000474805 BPIFB2Q8N4F0 458 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 TEX29Q8N6K0 151 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 LRRC17Q8N6Y2 441 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 CCDC63Q8NA47 563 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 MZB1Q8WU39 189 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 ROPN1LQ96C74 230 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 ZNF317Q96PQ6 595 aaPredicted RBP10.66□□□□□ -0.7
TRIM13-207ENST00000474805 PRPF18Q99633 342 aaKnown RBP10.66□□□□□ -0.7
TRIM13-207ENST00000474805 SYT3Q9BQG1 590 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 DUSP26Q9BV47 211 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 C1QTNF5Q9BXJ0 243 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 MS4A5Q9H3V2 200 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 PIF1Q9H611 641 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 NOX3Q9HBY0 568 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.66□□□□□ -0.7
TRIM13-207ENST00000474805 DDX28Q9NUL7 540 aaKnown RBP10.66□□□□□ -0.7
TRIM13-207ENST00000474805 CMYA5Q8N3K9 4069 aa10.66□□□□□ -0.7
TRIM13-207ENST00000474805 PRKDCP78527 4128 aaKnown RBP10.65□□□□□ -0.7
TRIM13-207ENST00000474805 RNF103-CHMP3A0A140T963 221 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 M0R233 179 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 PIP5K1BO14986 540 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 PLPP2O43688 288 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 PLIN3O60664 434 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 GLRA3O75311 464 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 MPZL1O95297 269 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 CPA3P15088 417 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 NR4A1P22736 598 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 ARR3P36575 388 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 EVX1P49640 407 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 P2RY4P51582 365 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 POU3F1Q03052 451 aaPredicted RBP10.65□□□□□ -0.7
TRIM13-207ENST00000474805 FUT5Q11128 374 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 MAD2L1BPQ15013 274 aaPredicted RBP10.65□□□□□ -0.7
TRIM13-207ENST00000474805 PGS1Q32NB8 556 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 UGT3A2Q3SY77 523 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 IL23RQ5VWK5 629 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 TNFAIP8L2Q6P589 184 aaPredicted RBP10.65□□□□□ -0.7
TRIM13-207ENST00000474805 MDP1Q86V88 176 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 LRP11Q86VZ4 500 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 TWIST2Q8WVJ9 160 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 MOV10Q9HCE1 1003 aaKnown RBP10.65□□□□□ -0.7
TRIM13-207ENST00000474805 SLC52A3Q9NQ40 469 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 ADPRHL2Q9NX46 363 aa10.65□□□□□ -0.7
TRIM13-207ENST00000474805 NOTCH1P46531 2555 aa10.65□□□□□ -0.71
TRIM13-207ENST00000474805 LYPLA1O75608 230 aaPredicted RBP10.64□□□□□ -0.71
TRIM13-207ENST00000474805 NCR1O76036 304 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 GSNP06396 782 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 GUSBP08236 651 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 ANPEPP15144 967 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 ZFP36P26651 326 aaKnown RBP10.64□□□□□ -0.71
TRIM13-207ENST00000474805 CAPZA2P47755 286 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 MAP2K6P52564 334 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 SH3BGRP55822 239 aaPredicted RBP10.64□□□□□ -0.71
TRIM13-207ENST00000474805 BNIP2Q12982 314 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 CCDC153Q494R4 210 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 GPAT3Q53EU6 434 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 ATAD3BQ5T9A4 648 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 ACSM5Q6NUN0 579 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 RIMKLAQ8IXN7 391 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 KDM8Q8N371 416 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 IL17RDQ8NFM7 739 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 NANPQ8TBE9 248 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 RNF217Q8TC41 542 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 OIT3Q8WWZ8 545 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 ZNF837Q96EG3 531 aaPredicted RBP10.64□□□□□ -0.71
TRIM13-207ENST00000474805 PPP3R2Q96LZ3 170 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 GATA5Q9BWX5 397 aaPredicted RBP10.64□□□□□ -0.71
TRIM13-207ENST00000474805 LINC00470Q9BZP3 86 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 ZNF665Q9H7R5 613 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 UNKLQ9H9P5 680 aaKnown RBP10.64□□□□□ -0.71
TRIM13-207ENST00000474805 POLE3Q9NRF9 147 aa10.64□□□□□ -0.71
TRIM13-207ENST00000474805 MYEF2Q9P2K5 600 aaKnown RBP10.64□□□□□ -0.71
TRIM13-207ENST00000474805 A0A0G2JMP0 313 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms