RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 P2RY4P51582 365 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 VLDLRP98155 873 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 BNIP2Q12982 314 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 SLC9B1Q4ZJI4 515 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 HIKESHIQ53FT3 197 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 C6orf52Q5T4I8 152 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 C1orf140Q5VVS0 124 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 CREB3L2Q70SY1 520 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 CLIP4Q8N3C7 705 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 STK35Q8TDR2 534 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 TMEM19Q96HH6 336 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 MANSC1Q9H8J5 431 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 MOKQ9UQ07 419 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 RASD1Q9Y272 281 aa15.28■□□□□ 0.04
COL7A1-208ENST00000470076 TMEM229AB2RXF0 380 aa15.27■□□□□ 0.04
COL7A1-208ENST00000470076 ZNF587BE7ETH6 402 aa15.27■□□□□ 0.04
COL7A1-208ENST00000470076 UBDO15205 165 aa15.27■□□□□ 0.04
COL7A1-208ENST00000470076 NPIPB7O75200 414 aa15.27■□□□□ 0.04
COL7A1-208ENST00000470076 POLR2JP52435 117 aaKnown RBP15.27■□□□□ 0.04
COL7A1-208ENST00000470076 GTDC1Q4AE62 458 aa15.27■□□□□ 0.04
COL7A1-208ENST00000470076 RPS26P11Q5JNZ5 115 aaPredicted RBP15.27■□□□□ 0.04
COL7A1-208ENST00000470076 C6orf10Q5SRN2 563 aa15.27■□□□□ 0.04
COL7A1-208ENST00000470076 PRAMEF8Q5VWM4 474 aa15.27■□□□□ 0.04
COL7A1-208ENST00000470076 PRAMEF7Q5VXH5 474 aa15.27■□□□□ 0.04
COL7A1-208ENST00000470076 C10orf105Q8TEF2 133 aa15.27■□□□□ 0.04
COL7A1-208ENST00000470076 PROX1Q92786 737 aa15.27■□□□□ 0.04
COL7A1-208ENST00000470076 SLC35B4Q969S0 331 aa15.27■□□□□ 0.04
COL7A1-208ENST00000470076 C3orf49Q96BT1 292 aa15.27■□□□□ 0.04
COL7A1-208ENST00000470076 ZNF317Q96PQ6 595 aaPredicted RBP15.27■□□□□ 0.04
COL7A1-208ENST00000470076 NKIRAS1Q9NYS0 192 aa15.27■□□□□ 0.04
COL7A1-208ENST00000470076 CHST2Q9Y4C5 530 aa15.27■□□□□ 0.04
COL7A1-208ENST00000470076 KLF11O14901 512 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 AHSA1O95433 338 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 F12P00748 615 aaPredicted RBP15.26■□□□□ 0.03
COL7A1-208ENST00000470076 SELENOPP49908 381 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 SWI5Q1ZZU3 235 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 TBRG1Q3YBR2 411 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 ZNF311Q5JNZ3 666 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 MAVSQ7Z434 540 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 SERPINA11Q86U17 422 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 MIER2Q8N344 545 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 OR9I1Q8NGQ6 314 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 OR1K1Q8NGR3 316 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 MFSD8Q8NHS3 518 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 VPS33AQ96AX1 596 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 SLC38A2Q96QD8 506 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 OR52B2Q96RD2 323 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 KCNS3Q9BQ31 491 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 RAD21L1Q9H4I0 556 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 MOV10Q9HCE1 1003 aaKnown RBP15.26■□□□□ 0.03
COL7A1-208ENST00000470076 BCL2L10Q9HD36 194 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 CDC42EP3Q9UKI2 254 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 CUBNO60494 3623 aa15.26■□□□□ 0.03
COL7A1-208ENST00000470076 IGHV1-18A0A0C4DH31 117 aa15.25■□□□□ 0.03
COL7A1-208ENST00000470076 LGI1O95970 557 aa15.25■□□□□ 0.03
COL7A1-208ENST00000470076 CRYAAP02489 173 aa15.25■□□□□ 0.03
COL7A1-208ENST00000470076 SH3BGRP55822 239 aaPredicted RBP15.25■□□□□ 0.03
COL7A1-208ENST00000470076 UBE2NP61088 152 aaKnown RBP15.25■□□□□ 0.03
COL7A1-208ENST00000470076 FADDQ13158 208 aa15.25■□□□□ 0.03
COL7A1-208ENST00000470076 RGNQ15493 299 aa15.25■□□□□ 0.03
COL7A1-208ENST00000470076 NIPAL3Q6P499 406 aa15.25■□□□□ 0.03
COL7A1-208ENST00000470076 EPHX4Q8IUS5 362 aa15.25■□□□□ 0.03
COL7A1-208ENST00000470076 MAGEE2Q8TD90 523 aaPredicted RBP15.25■□□□□ 0.03
COL7A1-208ENST00000470076 NANOS1Q8WY41 292 aaKnown RBP15.25■□□□□ 0.03
COL7A1-208ENST00000470076 GTF2H4Q92759 462 aa15.25■□□□□ 0.03
COL7A1-208ENST00000470076 BCL2L2Q92843 193 aaPredicted RBP15.25■□□□□ 0.03
COL7A1-208ENST00000470076 FBXO17Q96EF6 278 aa15.25■□□□□ 0.03
COL7A1-208ENST00000470076 ALKBH3Q96Q83 286 aaPredicted RBP15.25■□□□□ 0.03
COL7A1-208ENST00000470076 KATNB1Q9BVA0 655 aa15.25■□□□□ 0.03
COL7A1-208ENST00000470076 LINC00470Q9BZP3 86 aa15.25■□□□□ 0.03
COL7A1-208ENST00000470076 A4GALTQ9NPC4 353 aa15.25■□□□□ 0.03
COL7A1-208ENST00000470076 TMEM160Q9NX00 188 aa15.25■□□□□ 0.03
COL7A1-208ENST00000470076 PCDHB14Q9Y5E9 798 aa15.25■□□□□ 0.03
COL7A1-208ENST00000470076 FKBP7Q9Y680 259 aa15.25■□□□□ 0.03
COL7A1-208ENST00000470076 ARPC4-TTLL3A0A0A6YYG9 625 aa15.24■□□□□ 0.03
COL7A1-208ENST00000470076 FTCDNL1E5RQL4 147 aa15.24■□□□□ 0.03
COL7A1-208ENST00000470076 CLIC1O00299 241 aa15.24■□□□□ 0.03
COL7A1-208ENST00000470076 ZNF500O60304 480 aaPredicted RBP15.24■□□□□ 0.03
COL7A1-208ENST00000470076 FAM157CP0CG43 387 aa15.24■□□□□ 0.03
COL7A1-208ENST00000470076 PNMTP11086 282 aa15.24■□□□□ 0.03
COL7A1-208ENST00000470076 BMP2P12643 396 aa15.24■□□□□ 0.03
COL7A1-208ENST00000470076 HOXB1P14653 301 aaPredicted RBP15.24■□□□□ 0.03
COL7A1-208ENST00000470076 USF1P22415 310 aaPredicted RBP15.24■□□□□ 0.03
COL7A1-208ENST00000470076 GTF2E2P29084 291 aaKnown RBP15.24■□□□□ 0.03
COL7A1-208ENST00000470076 MAGOHP61326 146 aaKnown RBP15.24■□□□□ 0.03
COL7A1-208ENST00000470076 SNRPD2P62316 118 aaKnown RBP15.24■□□□□ 0.03
COL7A1-208ENST00000470076 LGALS3BPQ08380 585 aa15.24■□□□□ 0.03
COL7A1-208ENST00000470076 MST1LQ2TV78 715 aa15.24■□□□□ 0.03
COL7A1-208ENST00000470076 C3orf36Q3SXR2 165 aa15.24■□□□□ 0.03
COL7A1-208ENST00000470076 ANKRD16Q6P6B7 361 aa15.24■□□□□ 0.03
COL7A1-208ENST00000470076 ANKK1Q8NFD2 765 aa15.24■□□□□ 0.03
COL7A1-208ENST00000470076 BBS10Q8TAM1 723 aa15.24■□□□□ 0.03
COL7A1-208ENST00000470076 SLC25A36Q96CQ1 311 aa15.24■□□□□ 0.03
COL7A1-208ENST00000470076 KCNK17Q96T54 332 aa15.24■□□□□ 0.03
COL7A1-208ENST00000470076 PAIP1Q9H074 479 aaKnown RBP15.24■□□□□ 0.03
COL7A1-208ENST00000470076 RCE1Q9Y256 329 aa15.24■□□□□ 0.03
COL7A1-208ENST00000470076 RNF212BA8MTL3 300 aa15.23■□□□□ 0.03
COL7A1-208ENST00000470076 NDUFS8O00217 210 aa15.23■□□□□ 0.03
COL7A1-208ENST00000470076 UPK3AO75631 287 aa15.23■□□□□ 0.03
COL7A1-208ENST00000470076 NUDT7P0C024 238 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms