RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, human

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-205	ENST00000464480	POLR2J2	Q9GZM3	115 aa	Known RBP	2.59	□□□□□ -1.99
HMGXB4-205	ENST00000464480	POLR2J3	Q9H1A7	115 aa	Known RBP	2.59	□□□□□ -1.99
HMGXB4-205	ENST00000464480	OR51J1	Q9H342	316 aa		2.59	□□□□□ -1.99
HMGXB4-205	ENST00000464480	REEP4	Q9H6H4	257 aa		2.59	□□□□□ -1.99
HMGXB4-205	ENST00000464480	VCPKMT	Q9H867	229 aa		2.59	□□□□□ -1.99
HMGXB4-205	ENST00000464480	FOLH1B	Q9HBA9	442 aa		2.59	□□□□□ -1.99
HMGXB4-205	ENST00000464480	TMEM165	Q9HC07	324 aa		2.59	□□□□□ -1.99
HMGXB4-205	ENST00000464480	BFAR	Q9NZS9	450 aa		2.59	□□□□□ -1.99
HMGXB4-205	ENST00000464480	ATPIF1	Q9UII2	106 aa		2.59	□□□□□ -1.99
HMGXB4-205	ENST00000464480	ADAM28	Q9UKQ2	775 aa		2.59	□□□□□ -1.99
HMGXB4-205	ENST00000464480	CDH10	Q9Y6N8	788 aa		2.59	□□□□□ -1.99
HMGXB4-205	ENST00000464480		V9GY05	133 aa		2.59	□□□□□ -1.99
HMGXB4-205	ENST00000464480	ROCK2	O75116	1388 aa	Known RBP	2.59	□□□□□ -2
HMGXB4-205	ENST00000464480	RPAP1	Q9BWH6	1393 aa	Predicted RBP	2.59	□□□□□ -2
HMGXB4-205	ENST00000464480	PTPRG	P23470	1445 aa		2.59	□□□□□ -2
HMGXB4-205	ENST00000464480	SCAPER	Q9BY12	1400 aa		2.59	□□□□□ -2
HMGXB4-205	ENST00000464480	IGHV1OR21-1	A0A087WYE8	117 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	IGKV6D-41	A0A0C4DH26	115 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	FAM231B	A6NCW3	169 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480		A8MXQ7	604 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	GOLGA8S	H3BPF8	625 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	NDUFAB1	O14561	156 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	CXCL11	O14625	94 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	ABCD4	O14678	606 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	LSM1	O15116	133 aa	Known RBP	2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	CETN3	O15182	167 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	ZNF780A	O75290	641 aa	Predicted RBP	2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	CLDN9	O95484	217 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	IL1B	P01584	269 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	IGLV1-47	P01700	117 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	CD1E	P15812	388 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	ATP6V1B2	P21281	511 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	IL12A	P29459	219 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	GNA11	P29992	359 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	CCR1	P32246	355 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	RANBP1	P43487	201 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	QARS	P47897	775 aa	Known RBP	2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	KLK7	P49862	253 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	DUSP3	P51452	185 aa	Predicted RBP	2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	CAV2	P51636	162 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	WNT4	P56705	351 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	SELENOT	P62341	195 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	PPID	Q08752	370 aa	Known RBP	2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	DYNC1I2	Q13409	638 aa	Known RBP	2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	GRB7	Q14451	532 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	MICB	Q29980	383 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	PARP15	Q460N3	678 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	PDZK1	Q5T2W1	519 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	GPRC6A	Q5T6X5	926 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	OR52E8	Q6IFG1	317 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	C8orf74	Q6P047	294 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	EFL1	Q7Z2Z2	1120 aa	Known RBP	2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	RDH10	Q8IZV5	341 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	SLC7A5P1	Q8MH63	180 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	RNF10	Q8N5U6	811 aa	Known RBP	2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	LINC00469	Q8N7U9	141 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	EIF1AD	Q8N9N8	165 aa	Known RBP	2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	SPERT	Q8NA61	448 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	FAM83F	Q8NEG4	500 aa	Predicted RBP	2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	TRPV1	Q8NER1	839 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	CCDC148	Q8NFR7	591 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	OR51S1	Q8NGJ8	323 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	DYDC1	Q8WWB3	177 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	ANKRD7	Q92527	254 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	DCUN1D4	Q92564	292 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	UBE2E3	Q969T4	207 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	TMEM101	Q96IK0	257 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	SLC38A2	Q96QD8	506 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	SECISBP2	Q96T21	854 aa	Known RBP	2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	RNF2	Q99496	336 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	STMN4	Q9H169	189 aa	Predicted RBP	2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	CLSTN2	Q9H4D0	955 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	ASB8	Q9H765	288 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	VPS37B	Q9H9H4	285 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	PARVG	Q9HBI0	331 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	MCCC2	Q9HCC0	563 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	PLSCR3	Q9NRY6	295 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	FKBP14	Q9NWM8	211 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	MTRF1L	Q9UGC7	380 aa	Known RBP	2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	STAP1	Q9ULZ2	295 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	ASF1A	Q9Y294	204 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	PIGL	Q9Y2B2	252 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	ATP6V1D	Q9Y5K8	247 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	GMEB1	Q9Y692	573 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	CCDC171	Q6TFL3	1326 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	TMEM94	Q12767	1356 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	PLEKHG2	Q9H7P9	1386 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	BAZ1B	Q9UIG0	1483 aa	Known RBP	2.58	□□□□□ -2
HMGXB4-205	ENST00000464480	ATAD2B	Q9ULI0	1458 aa		2.58	□□□□□ -2
HMGXB4-205	ENST00000464480		A0A0G2JRQ6	117 aa		2.57	□□□□□ -2
HMGXB4-205	ENST00000464480	ATP8B1	O43520	1251 aa		2.57	□□□□□ -2
HMGXB4-205	ENST00000464480	SULT1B1	O43704	296 aa		2.57	□□□□□ -2
HMGXB4-205	ENST00000464480	KLHL41	O60662	606 aa		2.57	□□□□□ -2
HMGXB4-205	ENST00000464480	SURF6	O75683	361 aa	Known RBP	2.57	□□□□□ -2
HMGXB4-205	ENST00000464480	TSPAN12	O95859	305 aa		2.57	□□□□□ -2
HMGXB4-205	ENST00000464480	LGI1	O95970	557 aa		2.57	□□□□□ -2
HMGXB4-205	ENST00000464480	OPN1MW	P04001	364 aa		2.57	□□□□□ -2
HMGXB4-205	ENST00000464480	KLK3	P07288	261 aa	Predicted RBP	2.57	□□□□□ -2
HMGXB4-205	ENST00000464480	CAPN1	P07384	714 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms