RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 OR5D18Q8NGL1 313 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 ADAMTS14Q8WXS8 1223 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 FAM3CQ92520 227 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 MAP3K3Q99759 626 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 DEFB126Q9BYW3 111 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 EPHX3Q9H6B9 360 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 SLC2A4RGQ9NR83 387 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 PPP4R1LQ9P1A2 415 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 KLHL21Q9UJP4 597 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 NPR2P20594 1047 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 TACR3P29371 465 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 PRKAR1BP31321 381 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 MELKQ14680 651 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 FXNQ16595 210 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 ZNF793Q6ZN11 406 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 LINC00299Q6ZSB3 139 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 COX15Q7KZN9 410 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 VASH1Q7L8A9 365 aaPredicted RBP8.39□□□□□ -1.07
HPS4-208ENST00000464362 TMEM185AQ8NFB2 350 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 RSC1A1Q92681 617 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 PGAM5Q96HS1 289 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 OR2A14Q96R47 310 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 ACKR4Q9NPB9 350 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 ASB6Q9NWX5 421 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 GDE1Q9NZC3 331 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 SERGEFQ9UGK8 458 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 ZNF281Q9Y2X9 895 aa8.39□□□□□ -1.07
HPS4-208ENST00000464362 STMND1H3BQB6 276 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 M0QYG6 137 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 SLC43A1O75387 559 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 HIST1H1CP16403 213 aaKnown RBP8.38□□□□□ -1.07
HPS4-208ENST00000464362 DDOSTP39656 456 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 ACTBP60709 375 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 ACTG1P63261 375 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 NFATC4Q14934 902 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 ADAMTSL4Q6UY14 1074 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 RNF170Q96K19 258 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 DERL3Q96Q80 235 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 OR2M2Q96R28 347 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 ST6GALNAC5Q9BVH7 336 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 TSPAN10Q9H1Z9 355 aaPredicted RBP8.38□□□□□ -1.07
HPS4-208ENST00000464362 SLC38A1Q9H2H9 487 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 TESQ9UGI8 421 aaKnown RBP8.38□□□□□ -1.07
HPS4-208ENST00000464362 FBXL4Q9UKA2 621 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 DAPP1Q9UN19 280 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 A4GNTQ9UNA3 340 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 C14orf166Q9Y224 244 aaKnown RBP8.38□□□□□ -1.07
HPS4-208ENST00000464362 MEMO1Q9Y316 297 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 TRBV5-3A0A0A0MS03 114 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 A0A0A6YYH2 397 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 LINC01553A4QN01 128 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 FITM1A5D6W6 292 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 TRIM64A6NGJ6 449 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 TRIM64BA6NI03 449 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 A6NJ64 397 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 UBL3O95164 117 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 EIF4EP06730 217 aaKnown RBP8.38□□□□□ -1.07
HPS4-208ENST00000464362 EVX1P49640 407 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 DLX5P56178 289 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 POU3F1Q03052 451 aaPredicted RBP8.38□□□□□ -1.07
HPS4-208ENST00000464362 OPCMLQ14982 345 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 SLC25A35Q3KQZ1 300 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 RAET1LQ5VY80 246 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 CCDC190Q86UF4 302 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 IL17RDQ8NFM7 739 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 OR52I2Q8NH67 350 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 ZNF417Q8TAU3 575 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 STOML3Q8TAV4 291 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 SLC37A2Q8TED4 501 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 NXF5Q9H1B4 397 aaKnown RBP8.38□□□□□ -1.07
HPS4-208ENST00000464362 C2orf42Q9NWW7 574 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 ABRACLQ9P1F3 81 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 POLHQ9Y253 713 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 MED12Q93074 2177 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 KIF13BQ9NQT8 1826 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 WISP3O95389 354 aaPredicted RBP8.38□□□□□ -1.07
HPS4-208ENST00000464362 NID1P14543 1247 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 ZNF16P17020 682 aaPredicted RBP8.38□□□□□ -1.07
HPS4-208ENST00000464362 RBMS1P29558 406 aaKnown RBP8.38□□□□□ -1.07
HPS4-208ENST00000464362 CD79BP40259 229 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 MTNR1BP49286 362 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 ASAH1Q13510 395 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 GPR50Q13585 617 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 CHRFAM7AQ494W8 412 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 LIPNQ5VXI9 398 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 RPL22L1Q6P5R6 122 aaKnown RBP8.38□□□□□ -1.07
HPS4-208ENST00000464362 PARM1Q6UWI2 310 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 BAIAP2L2Q6UXY1 529 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 MED25Q71SY5 747 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 ZNF546Q86UE3 836 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 ZNF547Q8IVP9 402 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 OR13C9Q8NGT0 318 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 OR52N1Q8NH53 320 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 AUNIPQ9H7T9 357 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 PTGES2Q9H7Z7 377 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 LRIT1Q9P2V4 623 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 FTSJ1Q9UET6 329 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 ICKQ9UPZ9 632 aa8.38□□□□□ -1.07
HPS4-208ENST00000464362 MRPS17Q9Y2R5 130 aaKnown RBP8.38□□□□□ -1.07
HPS4-208ENST00000464362 RHBDD3Q9Y3P4 386 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms