RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CCDC182A6NF36 153 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 H7C2Y5 167 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 SYT5O00445 386 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 ITGB1BP1O14713 200 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 FRS3O43559 492 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 GDF9O60383 454 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 CLIC3O95833 236 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 CRHP06850 196 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 ZGLP1P0C6A0 271 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 RRASP10301 218 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 CD59P13987 128 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 DAPP51397 102 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 ERVK-25P63136 954 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 EXOC3L2Q2M3D2 409 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 COLEC12Q5KU26 742 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 RIPPLY2Q5TAB7 128 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 ZNF782Q6ZMW2 699 aaPredicted RBP9.52□□□□□ -0.88
HERC4-207ENST00000460168 ZNF605Q86T29 641 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 OR4D11Q8NGI4 311 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 OR6T1Q8NGN1 323 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 OR13F1Q8NGS4 319 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 NSMAFQ92636 917 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 TNFRSF14Q92956 283 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 RBPMSQ93062 196 aaKnown RBP9.52□□□□□ -0.88
HERC4-207ENST00000460168 TMCO6Q96DC7 493 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 FBXL20Q96IG2 436 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 DMRTB1Q96MA1 342 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 PFDN5Q99471 154 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 TCEAL7Q9BRU2 100 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 TGIF2Q9GZN2 237 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 NAA50Q9GZZ1 169 aaKnown RBP9.52□□□□□ -0.88
HERC4-207ENST00000460168 TMEM9BQ9NQ34 198 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 SLC22A11Q9NSA0 550 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 FBXO34Q9NWN3 711 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 ERVK-18Q9QC07 812 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 PRODH2Q9UF12 536 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 ZNF443Q9Y2A4 671 aaPredicted RBP9.52□□□□□ -0.88
HERC4-207ENST00000460168 OR10H1Q9Y4A9 318 aa9.52□□□□□ -0.88
HERC4-207ENST00000460168 CIB4A0PJX0 185 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 AGAP5A6NIR3 686 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 METTL15A6NJ78 407 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 H0YAE9 185 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 FFAR1O14842 300 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 SEC14L5O43304 696 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 KIAA0513O60268 411 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 SEMA7AO75326 666 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 UGT2B17O75795 530 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 EPPINO95925 133 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 IFNGP01579 166 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 CD3GP09693 182 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 FGF5P12034 268 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 BMP4P12644 408 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 SPNP16150 400 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 STAT5AP42229 794 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 EFNA3P52797 238 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 ASAH1Q13510 395 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 KDM4DQ6B0I6 523 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 JMJD6Q6NYC1 403 aaPredicted RBP9.52□□□□□ -0.89
HERC4-207ENST00000460168 TTC33Q6PID6 262 aaPredicted RBP9.52□□□□□ -0.89
HERC4-207ENST00000460168 OVCH2Q7RTZ1 564 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 MCEMP1Q8IX19 187 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 OFCC1Q8IZS5 231 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 TCTE3Q8IZS6 198 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 NANOGP1Q8N7R0 232 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 ZNF615Q8N8J6 731 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 POC5Q8NA72 575 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 CPEB3Q8NE35 698 aaKnown RBP9.52□□□□□ -0.89
HERC4-207ENST00000460168 ZNF555Q8NEP9 628 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 OR10G2Q8NGC3 310 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 OR4N2Q8NGD1 307 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 SLC2A12Q8TD20 617 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 HOXB13Q92826 284 aaPredicted RBP9.52□□□□□ -0.89
HERC4-207ENST00000460168 DAZLQ92904 295 aaKnown RBP9.52□□□□□ -0.89
HERC4-207ENST00000460168 CRELD1Q96HD1 420 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 CMKLR1Q99788 373 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 WDR77Q9BQA1 342 aaPredicted RBP9.52□□□□□ -0.89
HERC4-207ENST00000460168 ITPAQ9BY32 194 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 NMNAT1Q9HAN9 279 aaPredicted RBP9.52□□□□□ -0.89
HERC4-207ENST00000460168 KRT84Q9NSB2 600 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 ACER3Q9NUN7 267 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 RLIMQ9NVW2 624 aa9.52□□□□□ -0.89
HERC4-207ENST00000460168 AKAP7Q9P0M2 348 aaPredicted RBP9.52□□□□□ -0.89
HERC4-207ENST00000460168 TMEFF2Q9UIK5 374 aaPredicted RBP9.52□□□□□ -0.89
HERC4-207ENST00000460168 ELF5Q9UKW6 265 aaPredicted RBP9.52□□□□□ -0.89
HERC4-207ENST00000460168 IGLV3-12A0A075B6K2 115 aa9.51□□□□□ -0.89
HERC4-207ENST00000460168 NPIPA5A0A0B4J1W7 369 aa9.51□□□□□ -0.89
HERC4-207ENST00000460168 CLDN24A6NM45 220 aa9.51□□□□□ -0.89
HERC4-207ENST00000460168 NPIPA7E9PJI5 369 aa9.51□□□□□ -0.89
HERC4-207ENST00000460168 PEX12O00623 359 aa9.51□□□□□ -0.89
HERC4-207ENST00000460168 DBIP07108 87 aaKnown RBP9.51□□□□□ -0.89
HERC4-207ENST00000460168 H1F0P07305 194 aaKnown RBP9.51□□□□□ -0.89
HERC4-207ENST00000460168 NPIPA8P0DM63 369 aa9.51□□□□□ -0.89
HERC4-207ENST00000460168 CCL4P13236 92 aa9.51□□□□□ -0.89
HERC4-207ENST00000460168 POU1F1P28069 291 aa9.51□□□□□ -0.89
HERC4-207ENST00000460168 TACR3P29371 465 aa9.51□□□□□ -0.89
HERC4-207ENST00000460168 RORAP35398 523 aa9.51□□□□□ -0.89
HERC4-207ENST00000460168 CDH15P55291 814 aa9.51□□□□□ -0.89
HERC4-207ENST00000460168 RGS8P57771 180 aaPredicted RBP9.51□□□□□ -0.89
HERC4-207ENST00000460168 FOXL2P58012 376 aa9.51□□□□□ -0.89
HERC4-207ENST00000460168 PIN1Q13526 163 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms