RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 TMEM99Q8N816 258 aa8.95□□□□□ -0.98
ATG4A-206ENST00000457035 OR6S1Q8NH40 331 aa8.95□□□□□ -0.98
ATG4A-206ENST00000457035 RNF217Q8TC41 542 aa8.95□□□□□ -0.98
ATG4A-206ENST00000457035 PRRC1Q96M27 445 aa8.95□□□□□ -0.98
ATG4A-206ENST00000457035 PSD2Q9BQI7 771 aa8.95□□□□□ -0.98
ATG4A-206ENST00000457035 NAA11Q9BSU3 229 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-206ENST00000457035 MUC13Q9H3R2 512 aa8.95□□□□□ -0.98
ATG4A-206ENST00000457035 BCO1Q9HAY6 547 aa8.95□□□□□ -0.98
ATG4A-206ENST00000457035 KCNJ16Q9NPI9 418 aa8.95□□□□□ -0.98
ATG4A-206ENST00000457035 PLSCR4Q9NRQ2 329 aa8.95□□□□□ -0.98
ATG4A-206ENST00000457035 NDUFAF4Q9P032 175 aa8.95□□□□□ -0.98
ATG4A-206ENST00000457035 ENPP4Q9Y6X5 453 aa8.95□□□□□ -0.98
ATG4A-206ENST00000457035 ROS1P08922 2347 aa8.95□□□□□ -0.98
ATG4A-206ENST00000457035 CELSR2Q9HCU4 2923 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 TRAV36DV7A0A075B6V5 113 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 IGKV3D-15A0A087WSY6 115 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 TCRBV5S2A0A599 114 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 AQP7P3A6NL99 342 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 FAM90A27PA6NNH2 459 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 ZNF716A6NP11 495 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 ZNF724A8MTY0 619 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 A8MXE2 369 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 C19orf84I3L1E1 186 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 MSTNO14793 375 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 AHSA1O95433 338 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 BGLAPP02818 100 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 PTNP21246 168 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 NTF4P34130 210 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 RASSF2P50749 326 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 SLC16A1P53985 500 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 SIRPAP78324 504 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 VLDLRP98155 873 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 ST3GAL3Q11203 375 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 TRAP1Q12931 704 aaKnown RBP8.94□□□□□ -0.98
ATG4A-206ENST00000457035 SLC17A1Q14916 467 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 FBXL19-AS1Q494R0 122 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 SP5Q6BEB4 398 aaPredicted RBP8.94□□□□□ -0.98
ATG4A-206ENST00000457035 LCN8Q6JVE9 175 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 TTC33Q6PID6 262 aaPredicted RBP8.94□□□□□ -0.98
ATG4A-206ENST00000457035 NUFIP2Q7Z417 695 aaKnown RBP8.94□□□□□ -0.98
ATG4A-206ENST00000457035 DHFR2Q86XF0 187 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 MCEMP1Q8IX19 187 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 CNEP1R1Q8N9A8 125 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 ACBD4Q8NC06 268 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 SLC25A36Q96CQ1 311 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 ASB9Q96DX5 294 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 ZHX1-C8orf76Q96EF9 292 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 ZNF300Q96RE9 604 aaPredicted RBP8.94□□□□□ -0.98
ATG4A-206ENST00000457035 TAPBPLQ9BX59 468 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 SLC19A3Q9BZV2 496 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 PIGMQ9H3S5 423 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 MEPEQ9NQ76 525 aaPredicted RBP8.94□□□□□ -0.98
ATG4A-206ENST00000457035 MAN2C1Q9NTJ4 1040 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 KLHL9Q9P2J3 617 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 KLHL13Q9P2N7 655 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 RHCGQ9UBD6 479 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 AKAP6Q13023 2319 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 UNC79Q9P2D8 2635 aa8.94□□□□□ -0.98
ATG4A-206ENST00000457035 ITPR2Q14571 2701 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 PRSS44E7EML9 344 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 LRRN3E7EW58 273 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 MS4A18H0YCH9 400 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 PLGP00747 810 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-206ENST00000457035 IGF2P01344 180 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 CD8BP10966 210 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 RHCEP18577 417 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 GRPRP30550 384 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 AGTR1P30556 359 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 RBM34P42696 430 aaKnown RBP8.93□□□□□ -0.98
ATG4A-206ENST00000457035 UGT2B15P54855 530 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 CTBP2P56545 445 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 MFSD13AQ14CX5 517 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 MS4A18Q3C1V0 323 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 MTX3Q5HYI7 312 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 TMEM201Q5SNT2 666 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 OTUD3Q5T2D3 398 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-206ENST00000457035 ZNF474Q6S9Z5 364 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-206ENST00000457035 NHLRC1Q6VVB1 395 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 H1FNTQ75WM6 255 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-206ENST00000457035 PIWIL3Q7Z3Z3 882 aaKnown RBP8.93□□□□□ -0.98
ATG4A-206ENST00000457035 OFCC1Q8IZS5 231 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 ZIC4Q8N9L1 334 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 ZNF610Q8N9Z0 462 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 PIK3C3Q8NEB9 887 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 OR6K3Q8NGY3 331 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 PIGXQ8TBF5 258 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 TMEM255BQ8WV15 326 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 TMEM239Q8WW34 195 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 HS6ST2Q96MM7 605 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 MOGAT1Q96PD6 335 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 EPYCQ99645 322 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 FNDC11Q9BVV2 318 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 SF3B5Q9BWJ5 86 aaKnown RBP8.93□□□□□ -0.98
ATG4A-206ENST00000457035 OPN3Q9H1Y3 402 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-206ENST00000457035 NMNAT1Q9HAN9 279 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-206ENST00000457035 IL1RAPQ9NPH3 570 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.93□□□□□ -0.98
ATG4A-206ENST00000457035 SEC14L4Q9UDX3 406 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 EMC9Q9Y3B6 208 aa8.93□□□□□ -0.98
ATG4A-206ENST00000457035 V9GYQ6 96 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms