RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 RCN3Q96D15 328 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 COX14Q96I36 57 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 MUS81Q96NY9 551 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 ADAP2Q9NPF8 381 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 MLXQ9UH92 298 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 NXT1Q9UKK6 140 aaKnown RBP7.11□□□□□ -1.27
BRCC3-208ENST00000453705 FAM90A10PA6NDY2 464 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 MGAT4DA6NG13 374 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 DUXAA6NLW8 204 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 H3BN98 237 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 KPNA4O00629 521 aaPredicted RBP7.11□□□□□ -1.27
BRCC3-208ENST00000453705 CFLARO15519 480 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 GMDSO60547 372 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 SOD1P00441 154 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 HOXC4P09017 264 aaPredicted RBP7.11□□□□□ -1.27
BRCC3-208ENST00000453705 FTH1P19P0C7X4 201 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 UBCP0CG48 685 aaKnown RBP7.11□□□□□ -1.27
BRCC3-208ENST00000453705 FOSL2P15408 326 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 SDHAP31040 664 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 CCR7P32248 378 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 ACVR1BP36896 505 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 P2RY2P41231 377 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 PSMD4P55036 377 aaKnown RBP7.11□□□□□ -1.27
BRCC3-208ENST00000453705 TMEM33P57088 247 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 ACSM2AQ08AH3 577 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 OXA1LQ15070 435 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 TSC22D1Q15714 1073 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 TRIM16LQ309B1 348 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 ACSM2BQ68CK6 577 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 LCN8Q6JVE9 175 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 VWA1Q6PCB0 445 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 B3GLCTQ6Y288 498 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 ZNF836Q6ZNA1 936 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 Q6ZSR9 355 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 LAX1Q8IWV1 398 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 ENTHD1Q8IYW4 607 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 C2orf73Q8N5S3 287 aaPredicted RBP7.11□□□□□ -1.27
BRCC3-208ENST00000453705 CHDHQ8NE62 594 aaPredicted RBP7.11□□□□□ -1.27
BRCC3-208ENST00000453705 OR2L8Q8NGY9 312 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 HM13Q8TCT9 377 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 C2CD4CQ8TF44 421 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 UBL7Q96S82 380 aaPredicted RBP7.11□□□□□ -1.27
BRCC3-208ENST00000453705 SPAG8Q99932 426 aaPredicted RBP7.11□□□□□ -1.27
BRCC3-208ENST00000453705 UTP23Q9BRU9 249 aaKnown RBP7.11□□□□□ -1.27
BRCC3-208ENST00000453705 GPR174Q9BXC1 333 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 ARMC7Q9H6L4 198 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 CARS2Q9HA77 564 aaKnown RBP7.11□□□□□ -1.27
BRCC3-208ENST00000453705 GCM1Q9NP62 436 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 ANKRD10Q9NXR5 420 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 B9D1Q9UPM9 204 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 MMACHCQ9Y4U1 282 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 LRP12Q9Y561 859 aa7.11□□□□□ -1.27
BRCC3-208ENST00000453705 KLF2Q9Y5W3 355 aaPredicted RBP7.11□□□□□ -1.27
BRCC3-208ENST00000453705 FXYD1O00168 92 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 CREG1O75629 220 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 OR2J3O76001 311 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 GHRHP01286 108 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 APOC1P02654 83 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 ERGP11308 486 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 NUDT2P50583 147 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 FOXA1P55317 472 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 PCBP4P57723 403 aaKnown RBP7.1□□□□□ -1.27
BRCC3-208ENST00000453705 RBX1P62877 108 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 MRPS22P82650 360 aaKnown RBP7.1□□□□□ -1.27
BRCC3-208ENST00000453705 CTBSQ01459 385 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 IFITM2Q01629 132 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 CEACAM7Q14002 265 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 ZNF284Q2VY69 593 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 AGAP7PQ5VUJ5 663 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 LETMD1Q6P1Q0 360 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 TMEM71Q6P5X7 295 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 SLC16A9Q7RTY1 509 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 GPAT4Q86UL3 456 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 PAPD5Q8NDF8 572 aaKnown RBP7.1□□□□□ -1.27
BRCC3-208ENST00000453705 NUBPLQ8TB37 319 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 RPL10LQ96L21 214 aaKnown RBP7.1□□□□□ -1.27
BRCC3-208ENST00000453705 OR5B2Q96R09 309 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 JMJD8Q96S16 334 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 DOK1Q99704 481 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 LMF2Q9BU23 707 aaKnown RBP7.1□□□□□ -1.27
BRCC3-208ENST00000453705 MROQ9BYG7 248 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 PPP1R3EQ9H7J1 279 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 SYNPO2LQ9H987 977 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 SPAG4Q9NPE6 437 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 PRSS16Q9NQE7 514 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 SPATA6Q9NWH7 488 aaPredicted RBP7.1□□□□□ -1.27
BRCC3-208ENST00000453705 DEC1Q9P2X7 70 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 OPTCQ9UBM4 332 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 PDE10AQ9Y233 779 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 TESMINQ9Y4I5 508 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 PLXND1Q9Y4D7 1925 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 LOC100509620A0A075B734 347 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 CCRL2O00421 344 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 RFXANKO14593 260 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 RS1O15537 224 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 LINC01565O15544 149 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 RGS14O43566 566 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 RGS10O43665 173 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 SCO2O43819 266 aa7.1□□□□□ -1.27
BRCC3-208ENST00000453705 CTNSO60931 367 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms