RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 PCBD2Q9H0N5 130 aa4.8□□□□□ -1.64
SCN11A-202ENST00000444237 SEC61A2Q9H9S3 476 aa4.8□□□□□ -1.64
SCN11A-202ENST00000444237 TM7SF3Q9NS93 570 aa4.8□□□□□ -1.64
SCN11A-202ENST00000444237 RNF186Q9NXI6 227 aa4.8□□□□□ -1.64
SCN11A-202ENST00000444237 MARCH4Q9P2E8 410 aaPredicted RBP4.8□□□□□ -1.64
SCN11A-202ENST00000444237 hCG_1809904A0A1W2PP81 198 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 A0A1W2PR64 198 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 A0A1W2PRV1 198 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 OR2AG2A6NM03 316 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 H7BYZ3 331 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PRRG1O14668 218 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 GNRH1P01148 92 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CALCBP10092 127 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 HTR1FP30939 366 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 GSK3AP49840 483 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 FABP6P51161 128 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 FABP5Q01469 135 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PPA1Q15181 289 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 TEAD2Q15562 447 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 MPEG1Q2M385 716 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 TP53I3Q53FA7 332 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ALG10Q5BKT4 473 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 XKR7Q5GH72 579 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 NHLRC3Q5JS37 347 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF385CQ66K41 422 aaPredicted RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF626Q68DY1 528 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CYB5R2Q6BCY4 276 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 POMZP3Q6PJE2 187 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PLPPR4Q7Z2D5 763 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SERINC5Q86VE9 423 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 EIF4E3Q8N5X7 224 aaKnown RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 OR5L2Q8NGL0 311 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CASD1Q96PB1 797 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ACTL8Q9H568 366 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 TREX1Q9NSU2 369 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 TDP1Q9NUW8 608 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ASIC5Q9NY37 505 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 RASL12Q9NYN1 266 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 FBXO7Q9Y3I1 522 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 TIAM2Q8IVF5 1701 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 YJEFN3A6XGL0 299 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 A8MXK9 166 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 NDUFS8O00217 210 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SLC16A5O15375 505 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 IRAK2O43187 625 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PLRG1O43660 514 aaKnown RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 DPM1O60762 260 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ABLIM3O94929 683 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 HLA-HP01893 362 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 MMP3P08254 477 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 LIPCP11150 499 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 HOXB3P14651 431 aaPredicted RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ITGB7P26010 798 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 AK4P27144 223 aaPredicted RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PRDX3P30048 256 aaKnown RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 GPR4P46093 362 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SCAPQ12770 1279 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 C4orf17Q53FE4 359 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ATXN7L2Q5T6C5 722 aaPredicted RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ANKRD34AQ69YU3 496 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 TOMM20LQ6UXN7 152 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 DPY19L4Q7Z388 723 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF550Q7Z398 422 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 UBE3DQ7Z6J8 389 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 COX18Q8N8Q8 333 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SFXN5Q8TD22 340 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 RNF128Q8TEB7 428 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 METTL21AQ8WXB1 218 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 MRPS24Q96EL2 167 aaKnown RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ASB16Q96NS5 453 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SLC2A13Q96QE2 648 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 NMNAT2Q9BZQ4 307 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 MVB12BQ9H7P6 319 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PTGES2Q9H7Z7 377 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 TLR9Q9NR96 1032 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ZDHHC3Q9NYG2 299 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PLSCR5A0PG75 271 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 A6NIZ1 184 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 A6NLC8 198 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PPP6CO00743 305 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CCSO14618 274 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 KCNK5O95279 499 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 GBAP04062 536 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CKMP06732 381 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CXCL3P19876 107 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SERPINA2P20848 420 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CXCR1P25024 350 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CDX1P47902 265 aaPredicted RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CX3CR1P49238 355 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 RAP1BP61224 184 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PPIAP62937 165 aaKnown RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 DLK1P80370 383 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ACY1Q03154 408 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SOX4Q06945 474 aaPredicted RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SLC14A2Q15849 920 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 FAM110CQ1W6H9 321 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 AWAT1Q58HT5 328 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CST9LP1Q5W188 147 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 RPUSD3Q6P087 351 aaKnown RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ANKRD16Q6P6B7 361 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms