RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 POU2F1P14859 743 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 SFTPDP35247 375 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 DSTNP60981 165 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 SIRPAP78324 504 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 MRPL49Q13405 166 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 KRTCAP3Q53RY4 240 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 MRM1Q6IN84 353 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 KLHL24Q6TFL4 600 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 PEX5LQ8IYB4 626 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 SPPL2AQ8TCT8 520 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 NR4A3Q92570 626 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 HAS2Q92819 552 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 TRAF4Q9BUZ4 470 aaPredicted RBP6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 TGIF2Q9GZN2 237 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 C6orf62Q9GZU0 229 aaPredicted RBP6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 DDX31Q9H8H2 851 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 MGAT4BQ9UQ53 548 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 WDR45Q9Y484 360 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 FANCMQ8IYD8 2048 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 A0A0G2JMP0 313 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 FAAHO00519 579 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 LYPD3O95274 346 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 PCOLCEQ15113 449 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 SLC35F1Q5T1Q4 408 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 SEZ6L2Q6UXD5 910 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZNF793Q6ZN11 406 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 CD163Q86VB7 1156 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 P3H2Q8IVL5 708 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZNF843Q8N446 348 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 CDRT4Q8N9R6 151 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 OR7G1Q8NGA0 311 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 DUSP19Q8WTR2 217 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 OR5P2Q8WZ92 322 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 GIMAP5Q96F15 307 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 TMEM80Q96HE8 168 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 RASL10BQ96S79 203 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 KATNB1Q9BVA0 655 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 SARGQ9BW04 601 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 ASPNQ9BXN1 380 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 UCK2Q9BZX2 261 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 SEMA4CQ9C0C4 833 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 B3GAT2Q9NPZ5 323 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 TAS2R10Q9NYW0 307 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 CNIH4Q9P003 139 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 CFAP54Q96N23 3096 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 TMEM129A0AVI4 362 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 CIB4A0PJX0 185 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 B4DXG7 233 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 AGR2O95994 175 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 CSTAP01040 98 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 IGHA1P01876 353 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 CLEC2LP0C7M8 214 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 CAPZA2P47755 286 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 IDH2P48735 452 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 TNFSF10P50591 281 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 RPS26P62854 115 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 SPHARQ15513 63 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 C4orf46Q504U0 113 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 TRMT12Q53H54 448 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 RAB8BQ92930 207 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 TRIB1Q96RU8 372 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 SPATA5L1Q9BVQ7 753 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 OR2B2Q9GZK3 357 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 NTMQ9P121 344 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 SEC14L4Q9UDX3 406 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 MCTS1Q9ULC4 181 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 CBLCQ9ULV8 474 aa6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 EXOGQ9Y2C4 368 aaKnown RBP6.72□□□□□ -1.33
CDC42BPA-208ENST00000442054 A0A1B0GTH9 108 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 TCRBV16S1A1N1A0A5B0 115 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 NME6O75414 186 aaPredicted RBP6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 NTN1O95631 604 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 CHRM4P08173 479 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 CYC1P08574 325 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 HK1P19367 917 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 BMP5P22003 454 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 KIR2DL3P43628 341 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 GSTM5P46439 218 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 CLK1P49759 484 aaKnown RBP6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 KHKP50053 298 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 FXYD6P3P58550 94 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 PLAURQ03405 335 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 CDK10Q15131 360 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 LAMTOR1Q6IAA8 161 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 PODNL1Q6PEZ8 512 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 VASH1Q7L8A9 365 aaPredicted RBP6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 DUSP18Q8NEJ0 188 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 C16orf52Q8NHV5 167 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 TMEM234Q8WY98 164 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 DNAJA3Q96EY1 480 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 ARHGDIGQ99819 225 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 TREX2Q9BQ50 279 aaPredicted RBP6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 HES7Q9BYE0 225 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 NXF5Q9H1B4 397 aaKnown RBP6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 ZFP64Q9NPA5 681 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 ACSS1Q9NUB1 689 aaPredicted RBP6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 WASF3Q9UPY6 502 aa6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 SPIN1Q9Y657 262 aaPredicted RBP6.71□□□□□ -1.33
CDC42BPA-208ENST00000442054 LOC100506127A0A0U1RQW1 187 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms