RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 THUMPD1Q9NXG2 353 aaKnown RBP4.29□□□□□ -1.72
PTPN4-206ENST00000441089 VNN3Q9NY84 501 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 PRODH2Q9UF12 536 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 C19orf25Q9UFG5 118 aaPredicted RBP4.29□□□□□ -1.72
PTPN4-206ENST00000441089 PFDN2Q9UHV9 154 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 RIMS3Q9UJD0 308 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 MKLN1Q9UL63 735 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 AURKCQ9UQB9 309 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 LIPT1Q9Y234 373 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 KLF13Q9Y2Y9 288 aaPredicted RBP4.29□□□□□ -1.72
PTPN4-206ENST00000441089 CLCA3PQ9Y6N3 262 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 KIAA1549Q9HCM3 1950 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 PLCE1Q9P212 2302 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 NINQ8N4C6 2090 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 A0A0G2JPF8 293 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 C2orf92A0A1B0GVN3 265 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 AGAP5A6NIR3 686 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 TTC36A6NLP5 189 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 DUXAA6NLW8 204 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 OR6C76A6NM76 312 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 C17orf51A8MQB3 221 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 HNRNPCL2B2RXH8 293 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 B4DXG7 233 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 HNRNPCL3B7ZW38 293 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 C5orf58C9J3I9 102 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 hCG_2039718K7EN88 272 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 M0R3H8 397 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 WWP2O00308 870 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 FRS3O43559 492 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 TSPAN2O60636 221 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 TPST2O60704 377 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 STX11O75558 287 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 TIPRLO75663 272 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 UGT2B17O75795 530 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 PDE9AO76083 593 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 UTS2O95399 124 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 IL33O95760 270 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF682O95780 498 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 AGR2O95994 175 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 IL18BPO95998 194 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 AK1P00568 194 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 GPIP06744 558 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 GUSBP08236 651 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 PABPC4LP0CB38 370 aaKnown RBP4.28□□□□□ -1.72
PTPN4-206ENST00000441089 HNRNPCL4P0DMR1 293 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 UMPSP11172 480 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 CYP4B1P13584 511 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 GABRA1P14867 456 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 ETS2P15036 469 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 ANPEPP15144 967 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 MAGEA2P43356 314 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 OR1E2P47887 323 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 RFX3P48380 749 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 KCNJ5P48544 419 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 ATP5J2P56134 94 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 NANOS3P60323 173 aaKnown RBP4.28□□□□□ -1.72
PTPN4-206ENST00000441089 SELENOWP63302 87 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 EEF1A1P68104 462 aaKnown RBP4.28□□□□□ -1.72
PTPN4-206ENST00000441089 GPR68Q15743 365 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 NPTX1Q15818 432 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 NRF1Q16656 503 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.28□□□□□ -1.72
PTPN4-206ENST00000441089 CLEC12BQ2HXU8 276 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 BTBD16Q32M84 506 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 NDUFAF6Q330K2 333 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 MTX3Q5HYI7 312 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 FAM209AQ5JX71 171 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 C6orf52Q5T4I8 152 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 C1orf185Q5T7R7 199 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 ATAD3BQ5T9A4 648 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 INTS11Q5TA45 600 aaKnown RBP4.28□□□□□ -1.72
PTPN4-206ENST00000441089 FNDC7Q5VTL7 733 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 FCRLBQ6BAA4 426 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 PLAG1Q6DJT9 500 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 ZFP1Q6P2D0 407 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 DHRS4L2Q6PKH6 230 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 APOOLQ6UXV4 268 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 HSDL2Q6YN16 418 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF836Q6ZNA1 936 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 C16orf62Q7Z3J2 963 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 AMIGO2Q86SJ2 522 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 PATL1Q86TB9 770 aaKnown RBP4.28□□□□□ -1.72
PTPN4-206ENST00000441089 RBM45Q8IUH3 476 aaKnown RBP4.28□□□□□ -1.72
PTPN4-206ENST00000441089 C10orf67Q8IYJ2 551 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 ZNF619Q8N2I2 560 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 CLIP4Q8N3C7 705 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 SLC5A8Q8N695 610 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 LRRC17Q8N6Y2 441 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 MAPK1IP1LQ8NDC0 245 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 OR4C3Q8NH37 302 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 OR8K3Q8NH51 312 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 OR52P1PQ8NH57 321 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 LINC01560Q8TB33 94 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 NUBPLQ8TB37 319 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 M1APQ8TC57 530 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 TMEM171Q8WVE6 324 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 NRG4Q8WWG1 115 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 LRTOMTQ8WZ04 291 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 HGDQ93099 445 aa4.28□□□□□ -1.72
PTPN4-206ENST00000441089 TMBIM1Q969X1 311 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms