RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ARPC3O15145 178 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 VEGFDO43915 354 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 B4GALT3O60512 393 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 GLSO94925 669 aaPredicted RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 PMS2P2O95744 297 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 FGBP02675 491 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 SNRPBP14678 240 aaKnown RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 SLC2A5P22732 501 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 ACADLP28330 430 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 MANFP55145 182 aaKnown RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 DEFA5Q01523 94 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 DECR1Q16698 335 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 MBOAT2Q6ZWT7 520 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 MEPCEQ7L2J0 689 aaKnown RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 GALNT16Q8N428 558 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 OR1S2Q8NGQ3 325 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 PIGXQ8TBF5 258 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 LGALS14Q8TCE9 139 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 CPNE4Q96A23 557 aaPredicted RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 NRIP2Q9BQI9 281 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 TEX12Q9BXU0 123 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 DPEP2Q9H4A9 486 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 SMDT1Q9H4I9 107 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 ADAM29Q9UKF5 820 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 MOKQ9UQ07 419 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 LRBAP50851 2863 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 GGT3PA6NGU5 568 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 NPIPB15A6NHN6 443 aaPredicted RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 ZNF879B4DU55 563 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 CXCL14O95715 111 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 MT-ND4P03905 459 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 TRHRP34981 398 aaPredicted RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 HTR5AP47898 357 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 GDI2P50395 445 aaKnown RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 ACTR1AP61163 376 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 TRA2BP62995 288 aaKnown RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 HTRA3P83110 453 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 FAM76BQ5HYJ3 339 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 PYY3Q5JQD4 70 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 TNFAIP8L2Q6P589 184 aaPredicted RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 IQCHQ86VS3 1027 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 MITD1Q8WV92 249 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 TNFAIP8L1Q8WVP5 186 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 TIFAQ96CG3 184 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 YPEL4Q96NS1 127 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 SORBS1Q9BX66 1292 aaKnown RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 SLC17A5Q9NRA2 495 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 ICAM5Q9UMF0 924 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 MRPL42Q9Y6G3 142 aaKnown RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 A0A0A6YYH2 397 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 A6NJ64 397 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 SOCS6O14544 535 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 FMO6PO60774 539 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 CTNSO60931 367 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 IFI6P09912 130 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 PTAFRP25105 342 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 PYCR1P32322 319 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 FAUP35544 74 aaKnown RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 RAD52P43351 418 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 PSMA6P60900 246 aaKnown RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 MELKQ14680 651 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 SYPL1Q16563 259 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 TMEM244Q5VVB8 128 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 SLC6A19Q695T7 634 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 LRRN1Q6UXK5 716 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 ZNF740Q8NDX6 193 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 OR51G2Q8NGK0 314 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 PRSS27Q9BQR3 290 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 NRIP3Q9NQ35 241 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 C2orf42Q9NWW7 574 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 USP36Q9P275 1121 aaKnown RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 CPA4Q9UI42 421 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 ZNF840PA6NDX5 716 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 OR2W5A6NFC9 320 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 ADAMTS4O75173 837 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 CTSAP10619 480 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 ADRA2CP18825 462 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 BSGP35613 385 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 CD81P60033 236 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 DHRS2Q13268 280 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 ZNF177Q13360 481 aaPredicted RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 AWAT2Q6E213 333 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 ENPP7Q6UWV6 458 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 RBMS3Q6XE24 437 aaKnown RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 C7orf57Q8NEG2 295 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 OR4C16Q8NGL9 310 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 OR9A4Q8NGU2 314 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 C1QTNF2Q9BXJ5 285 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 GLIPR2Q9H4G4 154 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 OR5V1Q9UGF6 321 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 DPP7Q9UHL4 492 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 PCDHGA1Q9Y5H4 931 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 DMDP11532 3685 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 KRT33AO76009 404 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 PLGP00747 810 aaPredicted RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 ANXA2P07355 339 aaKnown RBP4.72□□□□□ -1.65
RIF1-203ENST00000428287 CAV2P51636 162 aa4.72□□□□□ -1.65
RIF1-203ENST00000428287 SIRPAP78324 504 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms