RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 C7orf34Q96L11 122 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 EPYCQ99645 322 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 MUC13Q9H3R2 512 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 ELOVL5Q9NYP7 299 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 EMC3Q9P0I2 261 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 B3GAT1Q9P2W7 334 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 SEC14L4Q9UDX3 406 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 SAMD4AQ9UPU9 718 aaKnown RBP16.55■□□□□ 0.24
PTCD3-204ENST00000418628 CADP27708 2225 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 GPR171O14626 319 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 HNRNPRO43390 633 aaKnown RBP16.54■□□□□ 0.24
PTCD3-204ENST00000418628 VAMP5O95183 116 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 ATP6V1B2P21281 511 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 UQCRC1P31930 480 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 CD79BP40259 229 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 RBM34P42696 430 aaKnown RBP16.54■□□□□ 0.24
PTCD3-204ENST00000418628 TAS2R41P59536 307 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 MFSD13AQ14CX5 517 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 GALNT5Q7Z7M9 940 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 NKAIN4Q8IVV8 208 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 GABRG1Q8N1C3 465 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 ZIC4Q8N9L1 334 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 SCAIQ8N9R8 606 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 OR9K2Q8NGE7 335 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 MOGAT1Q96PD6 335 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 C12orf49Q9H741 205 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 MEPEQ9NQ76 525 aaPredicted RBP16.54■□□□□ 0.24
PTCD3-204ENST00000418628 ACTR3BQ9P1U1 418 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 RIMS3Q9UJD0 308 aa16.54■□□□□ 0.24
PTCD3-204ENST00000418628 ANKRD17O75179 2603 aaKnown RBP16.54■□□□□ 0.24
PTCD3-204ENST00000418628 HEATR1Q9H583 2144 aaKnown RBP16.54■□□□□ 0.24
PTCD3-204ENST00000418628 AKAP6Q13023 2319 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 M0R082 166 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 MT-ATP6P00846 226 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 COX6B1P14854 86 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 PTNP21246 168 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 GRPRP30550 384 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 UGT2B15P54855 530 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 BNIP1Q12981 228 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 ZNF74Q16587 644 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 LCN8Q6JVE9 175 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 KIF18BQ86Y91 864 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 ZNF295-AS1Q8N0V1 137 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 ZNF417Q8TAU3 575 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 ZNF587Q96SQ5 575 aaPredicted RBP16.53■□□□□ 0.24
PTCD3-204ENST00000418628 FANCFQ9NPI8 374 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 RASD1Q9Y272 281 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 B3GALT5Q9Y2C3 310 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 CORINQ9Y5Q5 1042 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 ENPP4Q9Y6X5 453 aa16.53■□□□□ 0.24
PTCD3-204ENST00000418628 PLCE1Q9P212 2302 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 LOC102725191A0A1B0GVB3 256 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 LRRN3E7EW58 273 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 J3KTA2 159 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 CNOT4O95628 575 aaKnown RBP16.52■□□□□ 0.24
PTCD3-204ENST00000418628 VLDLRP98155 873 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 FAM27E3Q08E93 113 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 TTC33Q6PID6 262 aaPredicted RBP16.52■□□□□ 0.24
PTCD3-204ENST00000418628 NHLRC1Q6VVB1 395 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 BEND4Q6ZU67 534 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 SLC46A3Q7Z3Q1 461 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 TMEM255BQ8WV15 326 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 MARVELD3Q96A59 401 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 SLC25A36Q96CQ1 311 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 DHRS1Q96LJ7 313 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 NSMCE2Q96MF7 247 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 MRPL39Q9NYK5 338 aaKnown RBP16.52■□□□□ 0.24
PTCD3-204ENST00000418628 NDUFAF4Q9P032 175 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 MALT1Q9UDY8 824 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 KCNN3Q9UGI6 736 aa16.52■□□□□ 0.24
PTCD3-204ENST00000418628 TACC2O95359 2948 aa16.52■□□□□ 0.23
PTCD3-204ENST00000418628 TCRBV5S2A0A599 114 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 PDE5AO76074 875 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 MT-ND1P03886 318 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 ASAH2BP0C7U1 165 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 POU2F1P14859 743 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 PSMB1P20618 241 aaKnown RBP16.51■□□□□ 0.23
PTCD3-204ENST00000418628 COX5AP20674 150 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 UGT2B10P36537 528 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 MS4A2Q01362 244 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 ST3GAL3Q11203 375 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 TRIM25Q14258 630 aaKnown RBP16.51■□□□□ 0.23
PTCD3-204ENST00000418628 MTX3Q5HYI7 312 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 PGM2L1Q6PCE3 622 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 STAC2Q6ZMT1 411 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 FKBP9P1Q75LS8 142 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 EPHX4Q8IUS5 362 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 PIK3C3Q8NEB9 887 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 RNF217Q8TC41 542 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 LIPHQ8WWY8 451 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 ASB9Q96DX5 294 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 C14orf79Q96F83 325 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 PYURFQ96I23 114 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 ZNF385AQ96PM9 386 aaKnown RBP16.51■□□□□ 0.23
PTCD3-204ENST00000418628 ANKRD19PQ9H560 264 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 FKRPQ9H9S5 495 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 SLC24A3Q9HC58 644 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 NOSIPQ9Y314 301 aaKnown RBP16.51■□□□□ 0.23
PTCD3-204ENST00000418628 SPG11Q96JI7 2443 aa16.51■□□□□ 0.23
PTCD3-204ENST00000418628 ROS1P08922 2347 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms