RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 ZNF674Q2M3X9 581 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 TUSC1Q2TAM9 212 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 AKR1C8PQ5T2L2 129 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 CDS1Q92903 461 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 C14orf79Q96F83 325 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 TRMT61AQ96FX7 289 aaKnown RBP13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 MS4A8Q9BY19 250 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 TMEM231Q9H6L2 316 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 KCNJ16Q9NPI9 418 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 COPS7AQ9UBW8 275 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 PTPRFP10586 1907 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 GAPDHSO14556 408 aaPredicted RBP13.52□□□□□ -0.24
RPRD1A-202ENST00000399022 IRF3Q14653 427 aa13.52□□□□□ -0.24
RPRD1A-202ENST00000399022 ZNF77Q15935 545 aa13.52□□□□□ -0.24
RPRD1A-202ENST00000399022 PUS10Q3MIT2 529 aaKnown RBP13.52□□□□□ -0.24
RPRD1A-202ENST00000399022 ZNF628Q5EBL2 1059 aa13.52□□□□□ -0.24
RPRD1A-202ENST00000399022 PTCHD1Q96NR3 888 aa13.52□□□□□ -0.24
RPRD1A-202ENST00000399022 NXF2Q9GZY0 626 aaKnown RBP13.52□□□□□ -0.24
RPRD1A-202ENST00000399022 NKX2-4Q9H2Z4 354 aa13.52□□□□□ -0.24
RPRD1A-202ENST00000399022 HINT3Q9NQE9 182 aaKnown RBP13.52□□□□□ -0.24
RPRD1A-202ENST00000399022 INPP5EQ9NRR6 644 aa13.52□□□□□ -0.24
RPRD1A-202ENST00000399022 TVP23AA6NH52 213 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 SCDO00767 359 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 SLC2A10O95528 541 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 ZNF20P17024 532 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 CXCR1P25024 350 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 SIRPAP78324 504 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 CRMP1Q14194 572 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 FAM71E1Q6IPT2 247 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 GPAT4Q86UL3 456 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 TMEM99Q8N816 258 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 THRSPQ92748 146 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 TM4SF18Q96CE8 201 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 PDXPQ96GD0 296 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 PDCD1LG2Q9BQ51 273 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 UBQLN3Q9H347 655 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 PRTFDC1Q9NRG1 225 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 MAN2C1Q9NTJ4 1040 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 MED17Q9NVC6 651 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 C14orf166Q9Y224 244 aaKnown RBP13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 SLC35A3Q9Y2D2 325 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 ZNF98A6NK75 572 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 AIFM1O95831 613 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 IGFALSP35858 605 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 LEG1Q6P5S2 330 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 LRFN4Q6PJG9 635 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 BPIFB2Q8N4F0 458 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 OR13C2Q8NGS9 318 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 NEURL3Q96EH8 262 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 TPSD1Q9BZJ3 242 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 HRASLSQ9HDD0 168 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 NRIP3Q9NQ35 241 aa13.52□□□□□ -0.25
RPRD1A-202ENST00000399022 MEIKINA0A087WXM9 373 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 AIPO00170 330 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 S1PR1P21453 382 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 CYCSP99999 105 aaKnown RBP13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 KIAA0040Q15053 153 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 LTB4RQ15722 352 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 ALG11Q2TAA5 492 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 LRRC69Q6ZNQ3 347 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 ZNF565Q8N9K5 539 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 OR13C5Q8NGS8 318 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 METTL21AQ8WXB1 218 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 MRI1Q9BV20 369 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 ZDHHC5Q9C0B5 715 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 B3GAT2Q9NPZ5 323 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 NDRG3Q9UGV2 375 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 MBD1Q9UIS9 605 aaPredicted RBP13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 A8MVJ9 347 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 HCCSP53701 268 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 LIM2P55344 173 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 Q5BKY6 102 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 ARL14Q8N4G2 192 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 BBS1Q8NFJ9 593 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 CXorf58Q96LI9 332 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 OR7D2Q96RA2 312 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 SULT4A1Q9BR01 284 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 GLIPR2Q9H4G4 154 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 GDE1Q9NZC3 331 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 LINC01553A4QN01 128 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 C11orf98E9PRG8 122 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 ZNF208O43345 1280 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 NDUFB2O95178 105 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 THEGLP0DJG4 465 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 ACHEP22303 614 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 SLC6A1P30531 599 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 EXOSC7Q15024 291 aaKnown RBP13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 DECR1Q16698 335 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 YOD1Q5VVQ6 348 aaPredicted RBP13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 TMEM65Q6PI78 240 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 TGIF2Q9GZN2 237 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 CHST8Q9H2A9 424 aa13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 MBNL1Q9NR56 388 aaKnown RBP13.51□□□□□ -0.25
RPRD1A-202ENST00000399022 MED6O75586 246 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 BAMBIQ13145 260 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 SLC25A35Q3KQZ1 300 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 LGALSLQ3ZCW2 172 aaPredicted RBP13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 GLYR1Q49A26 553 aaPredicted RBP13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 SFRP5Q5T4F7 317 aa13.5□□□□□ -0.25
RPRD1A-202ENST00000399022 LCN10Q6JVE6 187 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms