RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 MAPK14Q16539 360 aa12.19□□□□□ -0.46
NFKB1-202ENST00000394820 ZNF836Q6ZNA1 936 aa12.19□□□□□ -0.46
NFKB1-202ENST00000394820 DPY19L4Q7Z388 723 aa12.19□□□□□ -0.46
NFKB1-202ENST00000394820 TAF8Q7Z7C8 310 aa12.19□□□□□ -0.46
NFKB1-202ENST00000394820 ASPGQ86U10 573 aa12.19□□□□□ -0.46
NFKB1-202ENST00000394820 OR2L5Q8NG80 312 aa12.19□□□□□ -0.46
NFKB1-202ENST00000394820 ADAMTS14Q8WXS8 1223 aa12.19□□□□□ -0.46
NFKB1-202ENST00000394820 WNT2BQ93097 391 aa12.19□□□□□ -0.46
NFKB1-202ENST00000394820 FBXW5Q969U6 566 aa12.19□□□□□ -0.46
NFKB1-202ENST00000394820 Q96M85 177 aa12.19□□□□□ -0.46
NFKB1-202ENST00000394820 WDFY2Q96P53 400 aa12.19□□□□□ -0.46
NFKB1-202ENST00000394820 PPA2Q9H2U2 334 aa12.19□□□□□ -0.46
NFKB1-202ENST00000394820 HRASLS2Q9NWW9 162 aa12.19□□□□□ -0.46
NFKB1-202ENST00000394820 FITM1A5D6W6 292 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 KCNAB3O43448 404 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 RDH16O75452 317 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 TRAPPC2P0DI81 140 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 TRAPPC2BP0DI82 140 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 HOXB2P14652 356 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 EIF2B5Q13144 721 aaKnown RBP12.18□□□□□ -0.46
NFKB1-202ENST00000394820 DCST2Q5T1A1 773 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 AGBL4Q5VU57 503 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 MBOAT2Q6ZWT7 520 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 SSX6Q7RTT6 188 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 BPHLQ86WA6 291 aaPredicted RBP12.18□□□□□ -0.46
NFKB1-202ENST00000394820 PLPP7Q8NBV4 271 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 WDR89Q96FK6 387 aaPredicted RBP12.18□□□□□ -0.46
NFKB1-202ENST00000394820 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.18□□□□□ -0.46
NFKB1-202ENST00000394820 EPHX3Q9H6B9 360 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 HIST1H1CP16403 213 aaKnown RBP12.18□□□□□ -0.46
NFKB1-202ENST00000394820 S100A10P60903 97 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 MAT1AQ00266 395 aaKnown RBP12.18□□□□□ -0.46
NFKB1-202ENST00000394820 CDK5Q00535 292 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 PDE7AQ13946 482 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 EIF2B1Q14232 305 aaKnown RBP12.18□□□□□ -0.46
NFKB1-202ENST00000394820 ZNF169Q14929 603 aaPredicted RBP12.18□□□□□ -0.46
NFKB1-202ENST00000394820 LINC00303Q3SY05 128 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 CDNFQ49AH0 187 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 ARHGAP40Q5TG30 622 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 B3GNTL1Q67FW5 361 aaPredicted RBP12.18□□□□□ -0.46
NFKB1-202ENST00000394820 RHOUQ7L0Q8 258 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 LRRC56Q8IYG6 542 aaPredicted RBP12.18□□□□□ -0.46
NFKB1-202ENST00000394820 OR51S1Q8NGJ8 323 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 GPER1Q99527 375 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 TRAF4Q9BUZ4 470 aaPredicted RBP12.18□□□□□ -0.46
NFKB1-202ENST00000394820 COLEC10Q9Y6Z7 277 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 HEATR5BQ9P2D3 2071 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 URADA6NGE7 173 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 KLF8O95600 359 aaPredicted RBP12.18□□□□□ -0.46
NFKB1-202ENST00000394820 RD3LP0DJH9 198 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 RBMS1P29558 406 aaKnown RBP12.18□□□□□ -0.46
NFKB1-202ENST00000394820 TFF2Q03403 129 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 COL28A1Q2UY09 1125 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 C1orf53Q5VUE5 145 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 HLA-DQA1Q5Y7H0 255 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 LAMTOR1Q6IAA8 161 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 ABHD17CQ6PCB6 329 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 OR4N2Q8NGD1 307 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 TMEM106AQ96A25 262 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 C7orf50Q9BRJ6 194 aaKnown RBP12.18□□□□□ -0.46
NFKB1-202ENST00000394820 ZNF350Q9GZX5 532 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 THAP10Q9P2Z0 257 aaPredicted RBP12.18□□□□□ -0.46
NFKB1-202ENST00000394820 V9GY05 133 aa12.18□□□□□ -0.46
NFKB1-202ENST00000394820 DNAJB6O75190 326 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 UBL3O95164 117 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 RLN2P04090 185 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 PGAM2P15259 253 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 MTNR1BP49286 362 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 DPTQ07507 201 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 TMEM52BQ4KMG9 183 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 METTL11BQ5VVY1 283 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 NIPAL3Q6P499 406 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 PRSS41Q7RTY9 318 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 ZNF546Q86UE3 836 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 TOR1AIP2Q8NFQ8 470 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 OR2A1Q8NGT9 310 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 OR10K1Q8NGX5 313 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 BRIX1Q8TDN6 353 aaKnown RBP12.17□□□□□ -0.46
NFKB1-202ENST00000394820 ERVMER34-1Q9H9K5 563 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 CYSLTR2Q9NS75 346 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 MAN2C1Q9NTJ4 1040 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 SLC35A3Q9Y2D2 325 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 A0A1B0GWA3 101 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 SLC33A1O00400 549 aaPredicted RBP12.17□□□□□ -0.46
NFKB1-202ENST00000394820 CASC3O15234 703 aaKnown RBP12.17□□□□□ -0.46
NFKB1-202ENST00000394820 TBX6O95947 436 aaPredicted RBP12.17□□□□□ -0.46
NFKB1-202ENST00000394820 ZNF28P17035 718 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 PPP2CBP62714 309 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 PPP2CAP67775 309 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 MC2RQ01718 297 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 EEF1A2Q05639 463 aaKnown RBP12.17□□□□□ -0.46
NFKB1-202ENST00000394820 SPOCK1Q08629 439 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 TUSC1Q2TAM9 212 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 ITPRIPL2Q3MIP1 535 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 FAM69AQ5T7M9 428 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 ZNF776Q68DI1 518 aaPredicted RBP12.17□□□□□ -0.46
NFKB1-202ENST00000394820 SFTPA2Q8IWL1 248 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 PAQR8Q8TEZ7 354 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 MYADMQ96S97 322 aa12.17□□□□□ -0.46
NFKB1-202ENST00000394820 ARPC5LQ9BPX5 153 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms