RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 MS4A8Q9BY19 250 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 TREM1Q9NP99 234 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 ADAP2Q9NPF8 381 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 MBNL1Q9NR56 388 aaKnown RBP12.75□□□□□ -0.37
SDC1-202ENST00000381150 ZNF230Q9UIE0 474 aaPredicted RBP12.75□□□□□ -0.37
SDC1-202ENST00000381150 EXOGQ9Y2C4 368 aaKnown RBP12.75□□□□□ -0.37
SDC1-202ENST00000381150 PLEKHA6Q9Y2H5 1048 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 WDR45Q9Y484 360 aa12.75□□□□□ -0.37
SDC1-202ENST00000381150 A0A087WV48 116 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 A0A1B0GUH1 482 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 TMEM200CA6NKL6 621 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 F8W036 122 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 NDUFA2O43678 99 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 FARS2O95363 451 aaKnown RBP12.74□□□□□ -0.37
SDC1-202ENST00000381150 TGM6O95932 706 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 HIST1H2ABP04908 130 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 LAMP2P13473 410 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 MAKP20794 623 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 CDK2P24941 298 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 FPR3P25089 353 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 GJA4P35212 333 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 FOXK2Q01167 660 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 FAM69AQ5T7M9 428 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 HIST3H2AQ7L7L0 130 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 OR6V1Q8N148 313 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 OR4D10Q8NGI6 311 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 STK35Q8TDR2 534 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 DIO2Q92813 273 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 HIST1H2ACQ93077 130 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 TSPAN10Q9H1Z9 355 aaPredicted RBP12.74□□□□□ -0.37
SDC1-202ENST00000381150 OBP2AQ9NY56 170 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 ING1Q9UK53 422 aaPredicted RBP12.74□□□□□ -0.37
SDC1-202ENST00000381150 SLC6A5Q9Y345 797 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 ATG4BQ9Y4P1 393 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 SLC22A31A6NKX4 558 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 C1QTNF3-AMACRE9PGA6 284 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 TBX19O60806 448 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 CDC123O75794 336 aaPredicted RBP12.74□□□□□ -0.37
SDC1-202ENST00000381150 WDPCPO95876 746 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 ZGLP1P0C6A0 271 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 BLOC1S1P78537 153 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 PRR5P85299 388 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 GUCA2AQ02747 115 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 DYRK1AQ13627 763 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 CBFBQ13951 182 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 SLC9A5Q14940 896 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 SCGB2B2Q4G0G5 96 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 TSSK4Q6SA08 328 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 LINC01555Q8NAE3 123 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 THAP6Q8TBB0 222 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 THEM6Q8WUY1 208 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 CDS1Q92903 461 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 FBXO17Q96EF6 278 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 TEX101Q9BY14 249 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 CHST6Q9GZX3 395 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 DNTTIP1Q9H147 329 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 PELI2Q9HAT8 420 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 ABRACLQ9P1F3 81 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 OPN4Q9UHM6 478 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 MOKQ9UQ07 419 aa12.74□□□□□ -0.37
SDC1-202ENST00000381150 FARSAQ9Y285 508 aaKnown RBP12.74□□□□□ -0.37
SDC1-202ENST00000381150 CENPVL1A0A0U1RR11 272 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 PCCBP05166 539 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 CA3P07451 260 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 FRKP42685 505 aaPredicted RBP12.73□□□□□ -0.37
SDC1-202ENST00000381150 PCBP4P57723 403 aaKnown RBP12.73□□□□□ -0.37
SDC1-202ENST00000381150 GPM6BQ13491 265 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 ENPP2Q13822 863 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 PDGFRLQ15198 375 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 MUC20Q8N307 709 aaPredicted RBP12.73□□□□□ -0.37
SDC1-202ENST00000381150 HS6ST2Q96MM7 605 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 PLA2G2FQ9BZM2 168 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 SLC38A1Q9H2H9 487 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 TCF7L1Q9HCS4 588 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 KRCC1Q9NPI7 259 aaPredicted RBP12.73□□□□□ -0.37
SDC1-202ENST00000381150 SERGEFQ9UGK8 458 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 NPFFR2Q9Y5X5 522 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 DOCK8Q8NF50 2099 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 KANTRA0A1W2PQU2 76 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 F5H0A9 414 aaPredicted RBP12.73□□□□□ -0.37
SDC1-202ENST00000381150 SIGLEC6O43699 453 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 SC5DO75845 299 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 ITPKBP27987 946 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 MAPK14Q16539 360 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 GUCA2BQ16661 112 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 MBOAT2Q6ZWT7 520 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 UBE3DQ7Z6J8 389 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 TMEM17Q86X19 198 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 BEST3Q8N1M1 668 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 OR51S1Q8NGJ8 323 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 C1QTNF2Q9BXJ5 285 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 ZMAT3Q9HA38 289 aaKnown RBP12.73□□□□□ -0.37
SDC1-202ENST00000381150 SCN3AQ9NY46 2000 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 PLPP2O43688 288 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 RBBP9O75884 186 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 VSIG10L2P0DP72 767 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 SRMP19623 302 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 NRG3P56975 720 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 RUNX3Q13761 415 aa12.73□□□□□ -0.37
SDC1-202ENST00000381150 MLF2Q15773 248 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms