RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 FMO6PO60774 539 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 TNFSF15O95150 251 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 UTS2O95399 124 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 CSTAP01040 98 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 RAB40ALP0C0E4 278 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 GKN3PP0CG01 181 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 PRKAR1AP10644 381 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 SLC2A2P11168 524 aaPredicted RBP12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 ABCD3P28288 659 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 EXT1Q16394 746 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 AADACL4Q5VUY2 407 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 LHFPL3Q86UP9 236 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 ZNF441Q8N8Z8 693 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 OR52N1Q8NH53 320 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 CT55Q8WUE5 264 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 OMA1Q96E52 524 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 MARCH7Q9H992 704 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 POLHQ9Y253 713 aa12.01□□□□□ -0.49
SQSTM1-201ENST00000360718 ZNF354AO60765 605 aaPredicted RBP12□□□□□ -0.49
SQSTM1-201ENST00000360718 TRIM3O75382 744 aaPredicted RBP12□□□□□ -0.49
SQSTM1-201ENST00000360718 CSRP1P21291 193 aaKnown RBP12□□□□□ -0.49
SQSTM1-201ENST00000360718 TBXA2RP21731 343 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 HTR1FP30939 366 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 INPP1P49441 399 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 ZNF136P52737 540 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 PNLIPRP2P54317 469 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 BTBD16Q32M84 506 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 CLEC12AQ5QGZ9 265 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 ZNF440Q8IYI8 595 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 ZNF485Q8NCK3 441 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 ATP6V1C2Q8NEY4 427 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 LILRB4Q8NHJ6 448 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 CNOT9Q92600 299 aaKnown RBP12□□□□□ -0.49
SQSTM1-201ENST00000360718 SLC41A3Q96GZ6 507 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 ZNF700Q9H0M5 742 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 TMEM27Q9HBJ8 222 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 FARSAQ9Y285 508 aaKnown RBP12□□□□□ -0.49
SQSTM1-201ENST00000360718 NTNG1Q9Y2I2 539 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 HS3ST3B1Q9Y662 390 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 IGHV1-45A0A0A0MS14 117 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 TRAPPC13A5PLN9 417 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 TMEM200CA6NKL6 621 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 FAM25AB3EWG3 89 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 FAM25CB3EWG5 89 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 FAM25GB3EWG6 89 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 MASP2O00187 686 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 TSPAN2O60636 221 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 SLC19A2O60779 497 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 HLA-DQB1P01920 261 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 F8A1P23610 371 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 MAP2K3P46734 347 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 NHLH1Q02575 133 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 PCOLCEQ15113 449 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 PGGHGQ32M88 737 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 KLHL26Q53HC5 615 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 MBOAT2Q6ZWT7 520 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 NOXA1Q86UR1 476 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 TMPRSS12Q86WS5 348 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 Q8N402 240 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 OR2T33Q8NG76 320 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 NEIL3Q8TAT5 605 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 THAP3Q8WTV1 239 aaPredicted RBP12□□□□□ -0.49
SQSTM1-201ENST00000360718 ACOT12Q8WYK0 555 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 OTULINQ96BN8 352 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 ZC3HAV1LQ96H79 300 aaKnown RBP12□□□□□ -0.49
SQSTM1-201ENST00000360718 DMRTB1Q96MA1 342 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 SOSTQ9BQB4 213 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 DEFB126Q9BYW3 111 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 TRIM2Q9C040 744 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 B3GNT4Q9C0J1 378 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 SLA2Q9H6Q3 261 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 DNAJB12Q9NXW2 375 aaKnown RBP12□□□□□ -0.49
SQSTM1-201ENST00000360718 TCFL5Q9UL49 500 aa12□□□□□ -0.49
SQSTM1-201ENST00000360718 GTPBP1O00178 669 aaKnown RBP11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 PLA2G10O15496 165 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 IGHA1P01876 353 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 CELA2AP08217 269 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 PRG2P13727 222 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 ADH7P40394 386 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 KIR2DL3P43628 341 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 EVX1P49640 407 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 OR1Q1Q15612 314 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 SLC30A6Q6NXT4 461 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 CNIH2Q6PI25 160 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 SHFQ7M4L6 423 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 MEX3DQ86XN8 651 aaKnown RBP11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 SYT14Q8NB59 555 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 NLGN4YQ8NFZ3 816 aaPredicted RBP11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 PHOSPHO1Q8TCT1 267 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 UBASH3BQ8TF42 649 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 JAM3Q9BX67 310 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 PPP1R3EQ9H7J1 279 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 TNFRSF10DQ9UBN6 386 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 NUFIP1Q9UHK0 495 aaKnown RBP11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 NPFFR2Q9Y5X5 522 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 MPDZO75970 2070 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 OR6C70A6NIJ9 312 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 GABRPO00591 440 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 ADAM11O75078 769 aa11.99□□□□□ -0.49
SQSTM1-201ENST00000360718 ICOSLGO75144 302 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms