RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 A0A1W2PPK0 400 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 LRRC72A6NJI9 287 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 EFCAB7A8K855 629 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 TMPRSS11DO60235 418 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 NDUFS6O75380 124 aaKnown RBP9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 FBP1P09467 338 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 SLC2A5P22732 501 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 GPR1P46091 355 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 NPBWR1P48145 328 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 TAS2R20P59543 309 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 CXADRP78310 365 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 PRR5P85299 388 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 POU4F2Q12837 409 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 RNF212Q495C1 297 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 GLT8D1Q68CQ7 371 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 FCRLBQ6BAA4 426 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 PWWP2BQ6NUJ5 590 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 C11orf88Q6PI97 169 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 RBMS3Q6XE24 437 aaKnown RBP9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 PARS2Q7L3T8 475 aaKnown RBP9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 GDF7Q7Z4P5 450 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 MISPQ8IVT2 679 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 RAB42Q8N4Z0 105 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 VN1R2Q8NFZ6 395 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 OR5K2Q8NHB8 316 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 SYNPRQ8TBG9 265 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 STK35Q8TDR2 534 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 SMPDL3BQ92485 455 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 SGK3Q96BR1 496 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 BBS4Q96RK4 519 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 EGLN1Q9GZT9 426 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 C1orf198Q9H425 327 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 CMC2Q9NRP2 79 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 TAS2R8Q9NYW2 309 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 DPP7Q9UHL4 492 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 GPR55Q9Y2T6 319 aaPredicted RBP9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 SCN5AQ14524 2016 aa9.49□□□□□ -0.89
CHRNA1-202ENST00000348749 A0A1W2PRU2 124 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 FAM86C2PA6NEL3 165 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 UNC119BA6NIH7 251 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 RTCAO00442 366 aaKnown RBP9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 CTNSO60931 367 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 AGR2O95994 175 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 THY1P04216 161 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 MELTFP08582 738 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 SRMP19623 302 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 CDK2P24941 298 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 PTAFRP25105 342 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 PPM1AP35813 382 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 TSFMP43897 325 aaKnown RBP9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 NCBP2P52298 156 aaKnown RBP eCLIP9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 LBX1P52954 281 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 FXYD6P3P58550 94 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 NDUFAF6Q330K2 333 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 Q3ZCU0 254 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 LY6G6FQ5SQ64 297 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 TMEM215Q68D42 235 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 FIP1L1Q6UN15 594 aaKnown RBP9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 ZNF547Q8IVP9 402 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 GLB1L2Q8IW92 636 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 RNF113BQ8IZP6 322 aaKnown RBP9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 SYS1Q8N2H4 156 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 OR4C16Q8NGL9 310 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 OR1J4Q8NGS1 313 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 TMEM255BQ8WV15 326 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 SLC41A3Q96GZ6 507 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 ZNF75AQ96N20 296 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 ZNF285Q96NJ3 590 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 OR14A2Q96R54 314 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 TRMT61BQ9BVS5 477 aaKnown RBP9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 TMEM185BQ9H7F4 350 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 TCF7L1Q9HCS4 588 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 APMAPQ9HDC9 416 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 TMEM138Q9NPI0 162 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 C5AR2Q9P296 337 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 TAC3Q9UHF0 121 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 ETV7Q9Y603 341 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 LRRK1Q38SD2 2015 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 ACOD1A6NK06 481 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 COLCA2A8K830 154 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 H7BY64 318 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 H7C417 338 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 EMC8O43402 210 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 FRS3O43559 492 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 GLSO94925 669 aaPredicted RBP9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 RLN1P04808 185 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 MRPL3P09001 348 aaKnown RBP9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 CLTBP09497 229 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 CSF1P09603 554 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 IL9P15248 144 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 EPCAMP16422 314 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 PNLIPRP2P54317 469 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 UBE2MP61081 183 aaKnown RBP9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 ACTA2P62736 377 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 ACTG2P63267 376 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 PEA15Q15121 130 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 RPE65Q16518 533 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 RPL13AP3Q6NVV1 102 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 RPL22L1Q6P5R6 122 aaKnown RBP9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 LILRA6Q6PI73 481 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms