RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SMARCD3Q6STE5 483 aa24.28■■□□□ 1.48
SSBP4-202ENST00000348495 FAM180AQ6UWF9 173 aa24.28■■□□□ 1.48
SSBP4-202ENST00000348495 THSD4Q6ZMP0 1018 aa24.28■■□□□ 1.48
SSBP4-202ENST00000348495 OR5J2Q8NH18 312 aa24.28■■□□□ 1.48
SSBP4-202ENST00000348495 ZNF417Q8TAU3 575 aa24.28■■□□□ 1.48
SSBP4-202ENST00000348495 ZNF587Q96SQ5 575 aaPredicted RBP24.28■■□□□ 1.48
SSBP4-202ENST00000348495 TIMP4Q99727 224 aa24.28■■□□□ 1.48
SSBP4-202ENST00000348495 ASPNQ9BXN1 380 aa24.28■■□□□ 1.48
SSBP4-202ENST00000348495 AQP7O14520 342 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 EIF1AYO14602 144 aaKnown RBP24.27■■□□□ 1.48
SSBP4-202ENST00000348495 SLC16A6O15403 523 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 RCBTB2O95199 551 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 HIST1H2ABP04908 130 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 OR2B6P58173 313 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 SLC35A1P78382 337 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 H3F3AP84243 136 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 PTGES3Q15185 160 aaKnown RBP24.27■■□□□ 1.48
SSBP4-202ENST00000348495 C6orf52Q5T4I8 152 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 Q6ZPB1 254 aaPredicted RBP24.27■■□□□ 1.48
SSBP4-202ENST00000348495 HIST3H2AQ7L7L0 130 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 NANOGNBQ7Z5D8 188 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 UBQLNLQ8IYU4 475 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 DHRSXQ8N5I4 330 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 OR2V1Q8NHB1 315 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 OSTF1Q92882 214 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 HIST1H2ACQ93077 130 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 SAMD8Q96LT4 415 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 EXO5Q9H790 373 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 TAS2R5Q9NYW4 299 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 H0YAE9 185 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 DNPH1O43598 174 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 CSNK2A1P68400 391 aaPredicted RBP24.27■■□□□ 1.48
SSBP4-202ENST00000348495 KLRB1Q12918 225 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 ZNF239Q16600 458 aaKnown RBP24.27■■□□□ 1.48
SSBP4-202ENST00000348495 ST3GAL2Q16842 350 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 HBMQ6B0K9 141 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 SLC43A2Q8N370 569 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 MOSPD2Q8NHP6 518 aa24.27■■□□□ 1.48
SSBP4-202ENST00000348495 ZAR1LA6NP61 321 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 PLPP3O14495 311 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 NDUFB2O95178 105 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 CPN1P15169 458 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 POU1F1P28069 291 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 CAPGP40121 348 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 P2RY4P51582 365 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 RAC3P60763 192 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 PRPS1P60891 318 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 H1FNTQ75WM6 255 aaPredicted RBP24.26■■□□□ 1.47
SSBP4-202ENST00000348495 LRRC75AQ8NAA5 344 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 ADPRHL1Q8NDY3 354 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 OR10D3Q8NH80 312 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 TEX47Q8TBZ9 253 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 HRASLS5Q96KN8 279 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 GPR137Q96N19 417 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 PITX2Q99697 317 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 SRXN1Q9BYN0 137 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 CHST11Q9NPF2 352 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 IL20RAQ9UHF4 553 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 NDRG4Q9ULP0 352 aaKnown RBP24.26■■□□□ 1.47
SSBP4-202ENST00000348495 RAB26Q9ULW5 256 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 B3GALT5Q9Y2C3 310 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 LRRC42Q9Y546 428 aa24.26■■□□□ 1.47
SSBP4-202ENST00000348495 LOC100130705A0A1B0GUX0 176 aa24.25■■□□□ 1.47
SSBP4-202ENST00000348495 BLOC1S5-TXNDC5H3BN57 136 aa24.25■■□□□ 1.47
SSBP4-202ENST00000348495 AKR7A3O95154 331 aa24.25■■□□□ 1.47
SSBP4-202ENST00000348495 GTF2E2P29084 291 aaKnown RBP24.25■■□□□ 1.47
SSBP4-202ENST00000348495 AQP2P41181 271 aa24.25■■□□□ 1.47
SSBP4-202ENST00000348495 GIPRP48546 466 aa24.25■■□□□ 1.47
SSBP4-202ENST00000348495 CDK5Q00535 292 aa24.25■■□□□ 1.47
SSBP4-202ENST00000348495 RPL18Q07020 188 aaKnown RBP24.25■■□□□ 1.47
SSBP4-202ENST00000348495 PMS2P3Q13401 168 aa24.25■■□□□ 1.47
SSBP4-202ENST00000348495 PAQR6Q6TCH4 344 aa24.25■■□□□ 1.47
SSBP4-202ENST00000348495 CISD2Q8N5K1 135 aaKnown RBP24.25■■□□□ 1.47
SSBP4-202ENST00000348495 CYGBQ8WWM9 190 aa24.25■■□□□ 1.47
SSBP4-202ENST00000348495 WBP1Q96G27 269 aa24.25■■□□□ 1.47
SSBP4-202ENST00000348495 WDYHV1Q96HA8 205 aa24.25■■□□□ 1.47
SSBP4-202ENST00000348495 GPX7Q96SL4 187 aaPredicted RBP24.25■■□□□ 1.47
SSBP4-202ENST00000348495 TBC1D23Q9NUY8 699 aa24.25■■□□□ 1.47
SSBP4-202ENST00000348495 TNFRSF10DQ9UBN6 386 aa24.25■■□□□ 1.47
SSBP4-202ENST00000348495 BSNQ9UPA5 3926 aa24.25■■□□□ 1.47
SSBP4-202ENST00000348495 AGFG1P52594 562 aaKnown RBP24.24■■□□□ 1.47
SSBP4-202ENST00000348495 CARD18P57730 90 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 LY6DQ14210 128 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 WLSQ5T9L3 541 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 MEIOBQ8N635 442 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 TMEM99Q8N816 258 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 ZNF570Q96NI8 536 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 TSSK6Q9BXA6 273 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 SLC25A19Q9HC21 320 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 FANCFQ9NPI8 374 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 ZNF814B7Z6K7 855 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 CLEC12AQ5QGZ9 265 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 TMEM236Q5W0B7 351 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 TTC23Q5W5X9 447 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 ARHGAP11AQ6P4F7 1023 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 USP51Q70EK9 711 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 ZNF555Q8NEP9 628 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 FAR1Q8WVX9 515 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 PRDM14Q9GZV8 571 aa24.24■■□□□ 1.47
SSBP4-202ENST00000348495 PRRC2CQ9Y520 2896 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms