RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SLC25A36Q96CQ1 311 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 RAD21L1Q9H4I0 556 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 OBP2BQ9NPH6 170 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 ZIM2Q9NZV7 527 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 RPS6KB2Q9UBS0 482 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 RASD1Q9Y272 281 aa9.34□□□□□ -0.91
CAPN3-202ENST00000337571 ZNF443Q9Y2A4 671 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-202ENST00000337571 FBN1P35555 2871 aaKnown RBP9.34□□□□□ -0.92
CAPN3-202ENST00000337571 CR1P17927 2039 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 IGHV4-30-2A0A087WSY4 118 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 H7C417 338 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 KLF11O14901 512 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 AHSA1O95433 338 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 CRYAAP02489 173 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 CSF3P09919 207 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 ACAA2P42765 397 aaKnown RBP9.33□□□□□ -0.92
CAPN3-202ENST00000337571 EFNA4P52798 201 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 STX1BP61266 288 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 MAGOHP61326 146 aaKnown RBP9.33□□□□□ -0.92
CAPN3-202ENST00000337571 KRTAP1-1Q07627 177 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 CHRFAM7AQ494W8 412 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 HIKESHIQ53FT3 197 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 RNF220Q5VTB9 566 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 C1orf140Q5VVS0 124 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 C11orf71Q6IPW1 123 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 CREB3L2Q70SY1 520 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 CXXC5Q7LFL8 322 aaKnown RBP9.33□□□□□ -0.92
CAPN3-202ENST00000337571 OR10H5Q8NGA6 315 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 SPATA3Q8NHX4 192 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 HTRA1Q92743 480 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 ZNF385AQ96PM9 386 aaKnown RBP9.33□□□□□ -0.92
CAPN3-202ENST00000337571 TNFRSF13CQ96RJ3 184 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 SPATA9Q9BWV2 254 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 AMBRA1Q9C0C7 1298 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 MOV10Q9HCE1 1003 aaKnown RBP9.33□□□□□ -0.92
CAPN3-202ENST00000337571 SDR39U1Q9NRG7 319 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-202ENST00000337571 MOKQ9UQ07 419 aa9.33□□□□□ -0.92
CAPN3-202ENST00000337571 DSPPQ9NZW4 1301 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 CADP27708 2225 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 JMJD1CQ15652 2540 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 TLN2Q9Y4G6 2542 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 ELOA3DA6NLF2 546 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-202ENST00000337571 CLIC1O00299 241 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 GPRIN2O60269 458 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 ERLIN1O75477 346 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 AVPP01185 164 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 PRG2P13727 222 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 ZNF43P17038 809 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 SNRPD2P62316 118 aaKnown RBP9.32□□□□□ -0.92
CAPN3-202ENST00000337571 LOXL1Q08397 574 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-202ENST00000337571 C1DQ13901 141 aaKnown RBP9.32□□□□□ -0.92
CAPN3-202ENST00000337571 MAPK11Q15759 364 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 ELOA3BQ3SY89 546 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 SLC9B1Q4ZJI4 515 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 RPS26P11Q5JNZ5 115 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-202ENST00000337571 CYB5R2Q6BCY4 276 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 NIPAL3Q6P499 406 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 B3GLCTQ6Y288 498 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 SERPINA11Q86U17 422 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 CLIP4Q8N3C7 705 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 ZNF525Q8N782 197 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 GOLGA6L1Q8N7Z2 621 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 ZIC4Q8N9L1 334 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 ELOA3Q8NG57 546 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 MFSD8Q8NHS3 518 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 STK35Q8TDR2 534 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 PROX1Q92786 737 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 VPS33AQ96AX1 596 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 FBXO17Q96EF6 278 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 TMEM19Q96HH6 336 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 MAELQ96JY0 434 aaKnown RBP9.32□□□□□ -0.92
CAPN3-202ENST00000337571 SLC6A13Q9NSD5 602 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 SELENONQ9NZV5 590 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 FKBP7Q9Y680 259 aa9.32□□□□□ -0.92
CAPN3-202ENST00000337571 CSPG4Q6UVK1 2322 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 ATP6V1G2-DDX39BF2Z307 99 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 OR2T1O43869 369 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 LGI1O95970 557 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 SERPINF1P36955 418 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 RPS5P46782 204 aaKnown RBP9.31□□□□□ -0.92
CAPN3-202ENST00000337571 SELENOPP49908 381 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 MVDP53602 400 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 SH3BGRP55822 239 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-202ENST00000337571 SLC25A3Q00325 362 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 IL1RL1Q01638 556 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 RGNQ15493 299 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 TMEM249Q2WGJ8 235 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 TBRG1Q3YBR2 411 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 ANKRD16Q6P6B7 361 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 C5orf46Q6UWT4 87 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 KRT73Q86Y46 540 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 GPR137CQ8N3F9 429 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 OR1K1Q8NGR3 316 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 BBS10Q8TAM1 723 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 RNF217Q8TC41 542 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 HPS1Q92902 700 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 SLC35B4Q969S0 331 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 C3orf49Q96BT1 292 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 BOD1Q96IK1 185 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 ZNF317Q96PQ6 595 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms