RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 PSORS1C1Q9UIG5 152 aa14.85□□□□□ -0.03
PDLIM1-201ENST00000329399 EXPH5Q8NEV8 1989 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 IGLV3-32A0A0A0MS00 114 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 A0A1B0GTH9 108 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 WIPF3A6NGB9 483 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 C17orf51A8MQB3 221 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 B4DXG7 233 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 ZNF701M0R085 212 aaPredicted RBP14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 TFECO14948 347 aaPredicted RBP14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 HCRTR2O43614 444 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 GRK5P34947 590 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 PTGDSP41222 190 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 CASP3P42574 277 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 MAGEA5P43359 124 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 EFNB1P98172 346 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 C3AR1Q16581 482 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 KRTCAP3Q53RY4 240 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 SMARCD3Q6STE5 483 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 WDR88Q6ZMY6 472 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 NCCRP1Q6ZVX7 275 aaPredicted RBP14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 KCTD8Q6ZWB6 473 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 GPR141Q7Z602 305 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 ATG4DQ86TL0 474 aaPredicted RBP14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 FJX1Q86VR8 437 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 ALDH16A1Q8IZ83 802 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 SPARTQ8N0X7 666 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 ST8SIA1Q92185 356 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 RFKQ969G6 155 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 SGTBQ96EQ0 304 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 PSMG3-AS1Q96PY0 264 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 TSSK6Q9BXA6 273 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 FN3KQ9H479 309 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 ZDHHC11Q9H8X9 412 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 FKBP14Q9NWM8 211 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 CNIH4Q9P003 139 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 TNFRSF10DQ9UBN6 386 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 SH3BGRL2Q9UJC5 107 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 TINAGQ9UJW2 476 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 ZNF835Q9Y2P0 537 aa14.84□□□□□ -0.03
PDLIM1-201ENST00000329399 PTGES3LE9PB15 166 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 SLC19A2O60779 497 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 ADAM11O75078 769 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 PTP4A3O75365 173 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 TRIM3O75382 744 aaPredicted RBP14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 SOX14O95416 240 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 GP1BBP13224 206 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 FKBP2P26885 142 aaKnown RBP14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 FMO3P31513 532 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 CDH15P55291 814 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 SH3BGRP55822 239 aaPredicted RBP14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 PLGLB1Q02325 96 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 ZNF117Q03924 483 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 C3P1Q6ZMU1 363 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 Q6ZPB1 254 aaPredicted RBP14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 KIF18BQ86Y91 864 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 TMEM163Q8TC26 289 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 PLEKHA8Q96JA3 519 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 GALNT9Q9HCQ5 603 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 PLSCR2Q9NRY7 297 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 ZNF337Q9Y3M9 751 aa14.83□□□□□ -0.03
PDLIM1-201ENST00000329399 ADAM10O14672 748 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 SAGP10523 405 aaPredicted RBP14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 GPR4P46093 362 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 CCR4P51679 360 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 PRPS1P60891 318 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 TMED1Q13445 227 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 SNAPC1Q16533 368 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 RNLSQ5VYX0 342 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 TMEM236Q5W0B7 351 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 HIST2H2BCQ6DN03 193 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 GRINAQ7Z429 371 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 OAFQ86UD1 273 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 MARCH3Q86UD3 253 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 CCDC103Q8IW40 242 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 OR6S1Q8NH40 331 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 ZNF420Q8TAQ5 688 aaPredicted RBP14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 FANK1Q8TC84 345 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 JSRP1Q96MG2 331 aaPredicted RBP14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 GNRHR2Q96P88 292 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 COPS4Q9BT78 406 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 ANGPTL4Q9BY76 406 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 RTN4RQ9BZR6 473 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 MEPEQ9NQ76 525 aaPredicted RBP14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 TVP23BQ9NYZ1 205 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 SIGLEC7Q9Y286 467 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 SLC5A6Q9Y289 635 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 TRGV8A0A0C4DH27 118 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 ANKRD33BA6NCL7 494 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 IDH3BO43837 385 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 XPNPEP2O43895 674 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 MAKP20794 623 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 CXCR1P25024 350 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 SLC6A6P31641 620 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 POLR2HP52434 150 aaKnown RBP14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 HYAL4Q2M3T9 481 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 PGGHGQ32M88 737 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 C4orf17Q53FE4 359 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 KLHL22Q53GT1 634 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 EMC4Q5J8M3 183 aa14.82□□□□□ -0.04
PDLIM1-201ENST00000329399 SLC30A6Q6NXT4 461 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms