RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 CYP4F2P78329 520 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 CD226Q15762 336 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 ESCO2Q56NI9 601 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 NSUN5P2Q63ZY6 315 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 OGFOD3Q6PK18 319 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 HMGN2P46Q86SG4 172 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 SDR16C5Q8N3Y7 309 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 LRRC17Q8N6Y2 441 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 ST7LQ8TDW4 575 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 KAT2AQ92830 837 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 HS6ST2Q96MM7 605 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 C6orf62Q9GZU0 229 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-201ENST00000315544 TSPAN10Q9H1Z9 355 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-201ENST00000315544 AUNIPQ9H7T9 357 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 KCNK7Q9Y2U2 307 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 KIF26BQ2KJY2 2108 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 SVEP1Q4LDE5 3571 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 IRGMA1A4Y4 181 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 EFNA2O43921 213 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 CCNKO75909 580 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 HPP00738 406 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 PNLIPP16233 465 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 BCKDHBP21953 392 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 CARTPTQ16568 116 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 PNPLA2Q96AD5 504 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 OTUB1Q96FW1 271 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-201ENST00000315544 CCNL2Q96S94 520 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-201ENST00000315544 SECISBP2Q96T21 854 aaKnown RBP7.08□□□□□ -1.28
CNOT4-201ENST00000315544 THAP7Q9BT49 309 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-201ENST00000315544 NLNQ9BYT8 704 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 MOSPD1Q9UJG1 213 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 MGAT4AQ9UM21 535 aa7.08□□□□□ -1.28
CNOT4-201ENST00000315544 IGLV3-12A0A075B6K2 115 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 FAM183AA6NL82 134 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 E9PLN8 166 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 FABP7O15540 132 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 FGF16O43320 207 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 SLC22A5O76082 557 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 DXOO77932 396 aaKnown RBP7.07□□□□□ -1.28
CNOT4-201ENST00000315544 PNPP00491 289 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 CCL1P22362 96 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 RPL6Q02878 288 aaKnown RBP7.07□□□□□ -1.28
CNOT4-201ENST00000315544 SPEM2Q0P670 501 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 ZNF791Q3KP31 576 aaPredicted RBP7.07□□□□□ -1.28
CNOT4-201ENST00000315544 COX15Q7KZN9 410 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 RABEPKQ7Z6M1 372 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 CCDC116Q8IYX3 515 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 ZFP41Q8N8Y5 198 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 OR4E2Q8NGC2 313 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 OR4D10Q8NGI6 311 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 OR13C2Q8NGS9 318 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 RPLP0P6Q8NHW5 317 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 HAVCR1Q96D42 359 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 LOC100506127A0A0U1RQW1 187 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 TRAPPC13A5PLN9 417 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 IFITM5A6NNB3 132 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 HMSDA8MTL9 139 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 C1QTNF3-AMACRE9PGA6 284 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 MYL12BO14950 172 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 FADS1O60427 444 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 ALPPL2P10696 532 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 ZNF250P15622 560 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 MYL12AP19105 171 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 ACP1P24666 158 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 CCR9P51686 369 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 NCBP2P52298 156 aaKnown RBP eCLIP7.07□□□□□ -1.28
CNOT4-201ENST00000315544 HCCSP53701 268 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 SMIM11AP58511 58 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 RPS15AP62244 130 aaKnown RBP7.07□□□□□ -1.28
CNOT4-201ENST00000315544 HIST1H3AP68431 136 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 HIST2H3PS2Q5TEC6 136 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 EEF1A1P5Q5VTE0 462 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 CORO6Q6QEF8 472 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 HIST2H3AQ71DI3 136 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 RNF144BQ7Z419 303 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 CADM2Q8N3J6 435 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 STX19Q8N4C7 294 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 EID2Q8N6I1 236 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 NFAM1Q8NET5 270 aaPredicted RBP7.07□□□□□ -1.28
CNOT4-201ENST00000315544 VPS37AQ8NEZ2 397 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 TMEM239Q8WW34 195 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 LMF1Q96S06 567 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 EGLN1Q9GZT9 426 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 SLC6A17Q9H1V8 727 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 HRASLSQ9HDD0 168 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.07□□□□□ -1.28
CNOT4-201ENST00000315544 ZNF224Q9NZL3 707 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 POMT2Q9UKY4 750 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 NCOA6Q14686 2063 aaPredicted RBP7.07□□□□□ -1.28
CNOT4-201ENST00000315544 A8MV72 311 aaPredicted RBP7.07□□□□□ -1.28
CNOT4-201ENST00000315544 NDUFB6O95139 128 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 APODP05090 189 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 POU3F2P20265 443 aaPredicted RBP7.07□□□□□ -1.28
CNOT4-201ENST00000315544 EFNB2P52799 333 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 RGS1Q08116 209 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 ST3GAL3Q11203 375 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 KRR1Q13601 381 aaKnown RBP7.07□□□□□ -1.28
CNOT4-201ENST00000315544 ZNF74Q16587 644 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 C1orf100Q5SVJ3 147 aa7.07□□□□□ -1.28
CNOT4-201ENST00000315544 SIAH3Q8IW03 269 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms