RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 MRM1Q6IN84 353 aaKnown RBP13.49□□□□□ -0.25
COL6A2-202ENST00000310645 ZC3H14Q6PJT7 736 aaKnown RBP13.49□□□□□ -0.25
COL6A2-202ENST00000310645 ING5Q8WYH8 240 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 USB1Q9BQ65 265 aaKnown RBP13.49□□□□□ -0.25
COL6A2-202ENST00000310645 SLC6A17Q9H1V8 727 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 NCDNQ9UBB6 729 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 APOBEC3BQ9UH17 382 aaKnown RBP13.49□□□□□ -0.25
COL6A2-202ENST00000310645 ZNF346Q9UL40 294 aaKnown RBP13.49□□□□□ -0.25
COL6A2-202ENST00000310645 ABHD14A-ACY1A0A1B0GW23 586 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 HMSDA8MTL9 139 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 VEGFDO43915 354 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 IL5P05113 134 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 MST1P26927 711 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 SNRPNP63162 240 aaKnown RBP13.49□□□□□ -0.25
COL6A2-202ENST00000310645 CSRP2Q16527 193 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 EIPR1Q53HC9 387 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 MAMSTRQ6ZN01 415 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 NUDT18Q6ZVK8 323 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 TMED4Q7Z7H5 227 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 NAXDQ8IW45 347 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 RAB42Q8N4Z0 105 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 OR2L5Q8NG80 312 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 OR51S1Q8NGJ8 323 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 ZCCHC10Q8TBK6 192 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 ZNF681Q96N22 645 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 INSM2Q96T92 566 aaPredicted RBP13.49□□□□□ -0.25
COL6A2-202ENST00000310645 MNTQ99583 582 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 ADAT1Q9BUB4 502 aaKnown RBP13.49□□□□□ -0.25
COL6A2-202ENST00000310645 MENTQ9BUN1 341 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 EXO5Q9H790 373 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 IL21RQ9HBE5 538 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 SLC39A1Q9NY26 324 aa13.49□□□□□ -0.25
COL6A2-202ENST00000310645 EEF1A1P68104 462 aaKnown RBP13.48□□□□□ -0.25
COL6A2-202ENST00000310645 FLI1Q01543 452 aaPredicted RBP13.48□□□□□ -0.25
COL6A2-202ENST00000310645 KCNAB1Q14722 419 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 PON3Q15166 354 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 FNDC3BQ53EP0 1204 aaKnown RBP13.48□□□□□ -0.25
COL6A2-202ENST00000310645 ZNF230Q9UIE0 474 aaPredicted RBP13.48□□□□□ -0.25
COL6A2-202ENST00000310645 OR1A2Q9Y585 309 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 ZFPL1O95159 310 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 GTF2F2P13984 249 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 ACTA2P62736 377 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 ACTG2P63267 376 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 NTHL1P78549 312 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 ZNF546Q86UE3 836 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 SLC39A11Q8N1S5 342 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 LILRB1Q8NHL6 650 aaPredicted RBP13.48□□□□□ -0.25
COL6A2-202ENST00000310645 MS4A4EQ96PG1 132 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 NMNAT3Q96T66 252 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 KCNE5Q9UJ90 142 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 FBXL3Q9UKT7 428 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 DOCK9Q9BZ29 2069 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 FBXO45P0C2W1 286 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 OR2T7P0C7T2 308 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 NAT2P11245 290 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 ADRB3P13945 408 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 NANOS3P60323 173 aaKnown RBP13.48□□□□□ -0.25
COL6A2-202ENST00000310645 B2MP61769 119 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 RBMS2Q15434 407 aaKnown RBP13.48□□□□□ -0.25
COL6A2-202ENST00000310645 METRNLQ641Q3 311 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 OLFML2AQ68BL7 652 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 OR2T27Q8NH04 317 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 PBX4Q9BYU1 374 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 TMEM27Q9HBJ8 222 aa13.48□□□□□ -0.25
COL6A2-202ENST00000310645 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.48□□□□□ -0.25
COL6A2-202ENST00000310645 DNAH14Q0VDD8 3507 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 TRPM6Q9BX84 2022 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 A0A1B0GTH9 108 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 ZNF860A6NHJ4 632 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 DISC1C4P0D8 188 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 GPR31O00270 319 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 PRNPP04156 253 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 ERGP11308 486 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 SLC6A6P31641 620 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 NRROSQ86YC3 692 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 GLB1L2Q8IW92 636 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 TMEFF1Q8IYR6 380 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 RNF113BQ8IZP6 322 aaKnown RBP13.47□□□□□ -0.25
COL6A2-202ENST00000310645 SHISA5Q8N114 240 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 COX18Q8N8Q8 333 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 CXorf40AQ8TE69 158 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 TSNAXQ99598 290 aaKnown RBP13.47□□□□□ -0.25
COL6A2-202ENST00000310645 PRSS16Q9NQE7 514 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 ACTR10Q9NZ32 417 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 ERVK-19Q9WJR5 959 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 SLC6A5Q9Y345 797 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 PLEKHM1Q9Y4G2 1056 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 PTP4A3O75365 173 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 HSD17B2P37059 387 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 CBX5P45973 191 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 LUMP51884 338 aaPredicted RBP13.47□□□□□ -0.25
COL6A2-202ENST00000310645 MLF2Q15773 248 aaPredicted RBP13.47□□□□□ -0.25
COL6A2-202ENST00000310645 TMPRSS11FQ6ZWK6 438 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 LRRC25Q8N386 305 aaPredicted RBP13.47□□□□□ -0.25
COL6A2-202ENST00000310645 HAVCR1Q96D42 359 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 ZNF75AQ96N20 296 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 SPHK1Q9NYA1 384 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 SCN5AQ14524 2016 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 LRRK1Q38SD2 2015 aa13.47□□□□□ -0.25
COL6A2-202ENST00000310645 ARID1AO14497 2285 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms