RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 TIMM23BQ5SRD1 257 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 OTUD3Q5T2D3 398 aaPredicted RBP9.89□□□□□ -0.83
CLCC1-201ENST00000302500 SWT1Q5T5J6 900 aaKnown RBP9.89□□□□□ -0.83
CLCC1-201ENST00000302500 ZNF704Q6ZNC4 412 aaPredicted RBP9.89□□□□□ -0.83
CLCC1-201ENST00000302500 BHLHA15Q7RTS1 189 aaPredicted RBP9.89□□□□□ -0.83
CLCC1-201ENST00000302500 SNX32Q86XE0 403 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 TGIF2LYQ8IUE0 185 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 ARMC8Q8IUR7 673 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 TMEM123Q8N131 208 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 SMYD1Q8NB12 490 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 ADPRHL1Q8NDY3 354 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 WFDC11Q8NEX6 87 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 HSD17B8Q92506 261 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 KISS1RQ969F8 398 aaPredicted RBP9.89□□□□□ -0.83
CLCC1-201ENST00000302500 PLPPR2Q96GM1 343 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 MOGAT1Q96PD6 335 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 USB1Q9BQ65 265 aaKnown RBP9.89□□□□□ -0.83
CLCC1-201ENST00000302500 TRIM2Q9C040 744 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 ZNF701Q9NV72 531 aaPredicted RBP9.89□□□□□ -0.83
CLCC1-201ENST00000302500 EMC3Q9P0I2 261 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 ARMCX1Q9P291 453 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 ITGB1BP2Q9UKP3 347 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 SLC9A8Q9Y2E8 581 aa9.89□□□□□ -0.83
CLCC1-201ENST00000302500 NOSIPQ9Y314 301 aaKnown RBP9.89□□□□□ -0.83
CLCC1-201ENST00000302500 MS4A18H0YCH9 400 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 M0R3H8 397 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 TROVE2P10155 538 aaKnown RBP eCLIP9.88□□□□□ -0.83
CLCC1-201ENST00000302500 CXCR1P25024 350 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 SELENOPP49908 381 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 VEZF1Q14119 521 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 MS4A18Q3C1V0 323 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 ALG10BQ5I7T1 473 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 FAM69AQ5T7M9 428 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 ULK3Q6PHR2 472 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 DNM1P46Q6ZS02 220 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 TSEN54Q7Z6J9 526 aaKnown RBP9.88□□□□□ -0.83
CLCC1-201ENST00000302500 P2RY8Q86VZ1 359 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 LRRC75A-AS1Q8N1F1 130 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 ZNF611Q8N823 705 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 BHLHE22Q8NFJ8 381 aaPredicted RBP9.88□□□□□ -0.83
CLCC1-201ENST00000302500 DNAJA4Q8WW22 397 aaPredicted RBP9.88□□□□□ -0.83
CLCC1-201ENST00000302500 NEUROG1Q92886 237 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 APH1AQ96BI3 265 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 TMEM43Q9BTV4 400 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 SPATA5L1Q9BVQ7 753 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 EVA1AQ9H8M9 152 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 BEX4Q9NWD9 120 aaPredicted RBP9.88□□□□□ -0.83
CLCC1-201ENST00000302500 CMTM6Q9NX76 183 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 TAS2R16Q9NYV7 291 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 CR1P17927 2039 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 CHD3Q12873 2000 aaKnown RBP9.88□□□□□ -0.83
CLCC1-201ENST00000302500 CSPG4Q6UVK1 2322 aa9.88□□□□□ -0.83
CLCC1-201ENST00000302500 TMEM247A6NEH6 219 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 PRORSD1PA6NEY8 169 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 C5orf58C9J3I9 102 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 LRRN3E7EW58 273 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 RPL36A-HNRNPH2H7BZ11 118 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 HS3ST1O14792 307 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 MRASO14807 208 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 CASKO14936 926 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 VAMP5O95183 116 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 CD8AP01732 235 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 DRD4P21917 467 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 DNASE1P24855 282 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 RPS5P46782 204 aaKnown RBP9.87□□□□□ -0.83
CLCC1-201ENST00000302500 NR1H2P55055 460 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 COPZ1P61923 177 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 BSPH1Q075Z2 132 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 SF3A3Q12874 501 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLCC1-201ENST00000302500 FOXD4Q12950 439 aaPredicted RBP9.87□□□□□ -0.83
CLCC1-201ENST00000302500 FXNQ16595 210 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 CYP51A1Q16850 503 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 PGGHGQ32M88 737 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 ZNF613Q6PF04 617 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 C5orf46Q6UWT4 87 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 C20orf204Q6ZNR8 217 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 KRT73Q86Y46 540 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 P3H2Q8IVL5 708 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 SLC15A3Q8IY34 581 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 KDM8Q8N371 416 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 C1orf162Q8NEQ5 155 aaPredicted RBP9.87□□□□□ -0.83
CLCC1-201ENST00000302500 ZHX1-C8orf76Q96EF9 292 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 ZNF837Q96EG3 531 aaPredicted RBP9.87□□□□□ -0.83
CLCC1-201ENST00000302500 ZNF607Q96SK3 696 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 GSX2Q9BZM3 304 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 ARMC7Q9H6L4 198 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 MEPEQ9NQ76 525 aaPredicted RBP9.87□□□□□ -0.83
CLCC1-201ENST00000302500 MRGBPQ9NV56 204 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 ASB6Q9NWX5 421 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 ABCD2Q9UBJ2 740 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 ANGPT4Q9Y264 503 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 RASD1Q9Y272 281 aa9.87□□□□□ -0.83
CLCC1-201ENST00000302500 YLPM1P49750 1951 aaKnown RBP9.87□□□□□ -0.83
CLCC1-201ENST00000302500 TRAV36DV7A0A075B6V5 113 aa9.86□□□□□ -0.83
CLCC1-201ENST00000302500 LOC100653049A0A140TA62 436 aa9.86□□□□□ -0.83
CLCC1-201ENST00000302500 ZNF503-AS2A6NEH8 195 aa9.86□□□□□ -0.83
CLCC1-201ENST00000302500 CCT8L1PA6NM43 557 aa9.86□□□□□ -0.83
CLCC1-201ENST00000302500 FAM220BPB1ANY3 271 aa9.86□□□□□ -0.83
CLCC1-201ENST00000302500 M0R082 166 aa9.86□□□□□ -0.83
CLCC1-201ENST00000302500 NME4O00746 187 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms