RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 LAMB4A4D0S4 1761 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 SIGLEC6O43699 453 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 CPOXP36551 454 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 ACSM1Q08AH1 577 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 PLGLAQ15195 96 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 RPUSD3Q6P087 351 aaKnown RBP10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 ANKLE1Q8NAG6 615 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 HAVCR2Q8TDQ0 301 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 RHOVQ96L33 236 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 NXF5Q9H1B4 397 aaKnown RBP10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 POPDC3Q9HBV1 291 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 NENFQ9UMX5 172 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 LEXMQ3ZCV2 418 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 CLEC20AQ6ZU45 233 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 RHEBL1Q8TAI7 183 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 SLC2A8Q9NY64 477 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 CA14Q9ULX7 337 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 MROH1Q8NDA8 1641 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 MYO5AQ9Y4I1 1855 aaKnown RBP10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 PRPH2P23942 346 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 DAPP51397 102 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 TBPL1P62380 186 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 Q6ZRG5 221 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 ASGR2P07307 311 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 ERVPABLB-1P60509 514 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 RAB1AP62820 205 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 LETMD1Q6P1Q0 360 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 RXFP4Q8TDU9 374 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 AKIP1Q9NQ31 210 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 INPP5EQ9NRR6 644 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 LAMP3Q9UQV4 416 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 EGFP01133 1207 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 RPL17P18621 184 aaKnown RBP10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 FOXA1P55317 472 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 CMSS1Q9BQ75 279 aaKnown RBP10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 NLE1Q9NVX2 485 aaPredicted RBP10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 SLAMF8Q9P0V8 285 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 B4DGG1 531 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 ACTL6BO94805 426 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 POLR2IP36954 125 aaKnown RBP10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 TAS2R38P59533 333 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 MS4A13Q5J8X5 152 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 OR4K14Q8NGD5 310 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 SLC25A46Q96AG3 418 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 UPRTQ96BW1 309 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 FAM234AQ9H0X4 552 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 EVA1BQ9NVM1 165 aa10.99□□□□□ -0.65
SHROOM3-201ENST00000296043 ANKRD66B4E2M5 251 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 HAPLN1P10915 354 aaPredicted RBP10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 SELENOWP63302 87 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 CCINQ13939 588 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 RGNQ15493 299 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 ABLIM2Q6H8Q1 611 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 OVCH1Q7RTY7 1134 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 CPEB2Q7Z5Q1 589 aaKnown RBP10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 SCMH1Q96GD3 660 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 ZNF300Q96RE9 604 aaPredicted RBP10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 GPR174Q9BXC1 333 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 B2MP61769 119 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 ZNF266Q14584 549 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 CATSPERGQ6ZRH7 1159 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 MDGA2Q7Z553 956 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 CLDN22Q8N7P3 220 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 L3HYPDHQ96EM0 354 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 SUV39H2Q9H5I1 410 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 DMAC2Q9NW81 257 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 PSORS1C1Q9UIG5 152 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 AKAP12Q02952 1782 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 SYN3O14994 580 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 ACAA1P09110 424 aaPredicted RBP10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 SHC1P29353 583 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 PAFAH1B3Q15102 231 aaKnown RBP10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 IRF4Q15306 451 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 PNPLA1Q8N8W4 532 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 LILRA4P59901 499 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 ETFDHQ16134 617 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 SERPINA11Q86U17 422 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 KLHDC1Q8N7A1 406 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 OR2G2Q8NGZ5 317 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 AHCTF1Q8WYP5 2266 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 DIP2AQ14689 1571 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 TBX19O60806 448 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 PRAMEF19Q5SWL8 479 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 ARHGDIGQ99819 225 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 A0A1B0GTW7 788 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 SSSCA1O60232 199 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 OR2F2O95006 317 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 TTRP02766 147 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 OR2F1Q13607 317 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 ZNF534Q76KX8 674 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 MEPCEQ7L2J0 689 aaKnown RBP10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 SECTM1Q8WVN6 248 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 KCTD12Q96CX2 325 aaKnown RBP10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 ZNF558Q96NG5 402 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 SORCS2Q96PQ0 1159 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 GOLT1BQ9Y3E0 138 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 J3KTA2 159 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 FBXL22Q6P050 247 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 OR1F2PQ96R84 312 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 POLEQ07864 2286 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms