RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 IGSF6O95976 241 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 ZNF14P17017 642 aaPredicted RBP8.07□□□□□ -1.12
VAPB-201ENST00000265619 DGKAP23743 735 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 HOXA6P31267 233 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 CD96P40200 585 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 VIPR2P41587 438 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 PTH2RP49190 550 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 PFN3P60673 137 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 MST1LQ2TV78 715 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 FAM69AQ5T7M9 428 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.07□□□□□ -1.12
VAPB-201ENST00000265619 CPOQ8IVL8 374 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 CRIPAKQ8N1N5 446 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 OR6T1Q8NGN1 323 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 OR10R2Q8NGX6 335 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 MGME1Q9BQP7 344 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 SLC46A2Q9BY10 475 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 IL17CQ9P0M4 197 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 C5AR2Q9P296 337 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 CORO2BQ9UQ03 480 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 A0A087WUU8 490 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 ANKRD20A5PA0PJZ0 165 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 RFPL4AA6NLU0 287 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 RFPL4AL1F8VTS6 287 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 CLDN4O14493 209 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 TCAPO15273 167 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 CLDN11O75508 207 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 PMP2P02689 132 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 ATP1B1P05026 303 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 EDN3P14138 238 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 PPIBP23284 216 aaKnown RBP8.07□□□□□ -1.12
VAPB-201ENST00000265619 ACKR3P25106 362 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 OR12D2P58182 307 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 RNF4P78317 190 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 SYPL1Q16563 259 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 ARSIQ5FYB1 569 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 ELFN2Q5R3F8 820 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 UQCC3Q6UW78 93 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 UBE2R2Q712K3 238 aaPredicted RBP8.07□□□□□ -1.12
VAPB-201ENST00000265619 C6orf120Q7Z4R8 191 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 PXKQ7Z7A4 578 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 TMEM25Q86YD3 366 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 SMPDL3BQ92485 455 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 AMDHD1Q96NU7 426 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 IP6K3Q96PC2 410 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 SERINC2Q96SA4 455 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 NRSN2Q9GZP1 204 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 SLC25A18Q9H1K4 315 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 SUV39H2Q9H5I1 410 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 ZDHHC6Q9H6R6 413 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 FBXO4Q9UKT5 387 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 TRBV23OR9-2A0A075B6M9 112 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 LOC390937A0A1W2PQ73 354 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 SURF4O15260 269 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 SC5DO75845 299 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 ABLIM3O94929 683 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 F11P03951 625 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 CTSAP10619 480 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 CCR7P32248 378 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 CD70P32970 193 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 ID4P47928 161 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 SLC6A12P48065 614 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 P2RX1P51575 399 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 PITPNAQ00169 270 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 PTSQ03393 145 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 COTL1Q14019 142 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 GAMTQ14353 236 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 KRT33BQ14525 404 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 SURF2Q15527 256 aaPredicted RBP8.07□□□□□ -1.12
VAPB-201ENST00000265619 ZNF630Q2M218 657 aaPredicted RBP8.07□□□□□ -1.12
VAPB-201ENST00000265619 GGTA1PQ4G0N0 100 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 TPGS2Q68CL5 300 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 REEP3Q6NUK4 255 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 FAM219AQ8IW50 185 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 ETFBKMTQ8IXQ9 262 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 ZNF689Q96CS4 500 aaPredicted RBP8.07□□□□□ -1.12
VAPB-201ENST00000265619 C20orf24Q9BUV8 137 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 EDEM2Q9BV94 578 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 SLC6A16Q9GZN6 736 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 ASB8Q9H765 288 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 WASF3Q9UPY6 502 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 ANGPT4Q9Y264 503 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 RUVBL1Q9Y265 456 aaKnown RBP8.07□□□□□ -1.12
VAPB-201ENST00000265619 EXOGQ9Y2C4 368 aaKnown RBP8.07□□□□□ -1.12
VAPB-201ENST00000265619 SPTBP11277 2137 aa8.07□□□□□ -1.12
VAPB-201ENST00000265619 SNRPGP15A8MWD9 76 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 LEFTY2O00292 366 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 STX11O75558 287 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 XPAP23025 273 aaPredicted RBP8.06□□□□□ -1.12
VAPB-201ENST00000265619 CD1CP29017 333 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 PNLIPRP1P54315 467 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 PSMD4P55036 377 aaKnown RBP8.06□□□□□ -1.12
VAPB-201ENST00000265619 RPS13P62277 151 aaKnown RBP8.06□□□□□ -1.12
VAPB-201ENST00000265619 IRF8Q02556 426 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 NFATC2Q13469 925 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 TCEA2Q15560 299 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 CCSMST1Q4G0I0 132 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 KRBOX4Q5JUW0 171 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 YOD1Q5VVQ6 348 aaPredicted RBP8.06□□□□□ -1.12
VAPB-201ENST00000265619 GLT8D1Q68CQ7 371 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms