RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 SLC25A3Q00325 362 aa18.42■□□□□ 0.54
NEDD8-201ENST00000250495 ELOA3BQ3SY89 546 aa18.42■□□□□ 0.54
NEDD8-201ENST00000250495 ZNF311Q5JNZ3 666 aa18.42■□□□□ 0.54
NEDD8-201ENST00000250495 CXXC5Q7LFL8 322 aaKnown RBP18.42■□□□□ 0.54
NEDD8-201ENST00000250495 MIER2Q8N344 545 aa18.42■□□□□ 0.54
NEDD8-201ENST00000250495 ELOA3Q8NG57 546 aa18.42■□□□□ 0.54
NEDD8-201ENST00000250495 STK35Q8TDR2 534 aa18.42■□□□□ 0.54
NEDD8-201ENST00000250495 TNFRSF13CQ96RJ3 184 aa18.42■□□□□ 0.54
NEDD8-201ENST00000250495 RAD21L1Q9H4I0 556 aa18.42■□□□□ 0.54
NEDD8-201ENST00000250495 RASD1Q9Y272 281 aa18.42■□□□□ 0.54
NEDD8-201ENST00000250495 ZNF587BE7ETH6 402 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 PRG2P13727 222 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 P2RY4P51582 365 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 LOXL1Q08397 574 aaPredicted RBP18.41■□□□□ 0.54
NEDD8-201ENST00000250495 GTDC1Q4AE62 458 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 HIKESHIQ53FT3 197 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 RPS26P11Q5JNZ5 115 aaPredicted RBP18.41■□□□□ 0.54
NEDD8-201ENST00000250495 AGBL2Q5U5Z8 902 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 PRAMEF8Q5VWM4 474 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 PRAMEF7Q5VXH5 474 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 HMBOX1Q6NT76 420 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 PODNL1Q6PEZ8 512 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 CREB3L2Q70SY1 520 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 LSRQ86X29 649 aaPredicted RBP18.41■□□□□ 0.54
NEDD8-201ENST00000250495 FAM168AQ92567 244 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 SLC35B4Q969S0 331 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 VPS33AQ96AX1 596 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 C3orf49Q96BT1 292 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 OR52B2Q96RD2 323 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 TMBIM4Q9HC24 238 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 BCL2L10Q9HD36 194 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 CHST2Q9Y4C5 530 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 PCDHB14Q9Y5E9 798 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 DNHD1Q96M86 4753 aa18.41■□□□□ 0.54
NEDD8-201ENST00000250495 KLF11O14901 512 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 FRS3O43559 492 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 GPRIN2O60269 458 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 NPIPB7O75200 414 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 AHSA1O95433 338 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 EFNA4P52798 201 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 RGNQ15493 299 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 TTMPQ5BVD1 217 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 MAVSQ7Z434 540 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 SERPINA11Q86U17 422 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 OR9I1Q8NGQ6 314 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 MFSD8Q8NHS3 518 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 HTRA1Q92743 480 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 GTF2H4Q92759 462 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 ATP6V1G3Q96LB4 118 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 MOKQ9UQ07 419 aa18.4■□□□□ 0.54
NEDD8-201ENST00000250495 ATRQ13535 2644 aa18.39■□□□□ 0.54
NEDD8-201ENST00000250495 A0A096LNT2 108 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 ATP6V1G2-DDX39BF2Z307 99 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 CLIC1O00299 241 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 CSF3P09919 207 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 SELENOPP49908 381 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 UBE2NP61088 152 aaKnown RBP18.39■□□□□ 0.53
NEDD8-201ENST00000250495 FADDQ13158 208 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 TMEM249Q2WGJ8 235 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 TBRG1Q3YBR2 411 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 CHRFAM7AQ494W8 412 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 NIPAL3Q6P499 406 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 EPHX4Q8IUS5 362 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 ZNF525Q8N782 197 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 OR1K1Q8NGR3 316 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 PROX1Q92786 737 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 SLC25A36Q96CQ1 311 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 ZNF317Q96PQ6 595 aaPredicted RBP18.39■□□□□ 0.53
NEDD8-201ENST00000250495 KCNS3Q9BQ31 491 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 COL6A5A8TX70 2615 aa18.39■□□□□ 0.53
NEDD8-201ENST00000250495 ANK3Q12955 4377 aaKnown RBP18.39■□□□□ 0.53
NEDD8-201ENST00000250495 TMEM229AB2RXF0 380 aa18.38■□□□□ 0.53
NEDD8-201ENST00000250495 C5orf58C9J3I9 102 aa18.38■□□□□ 0.53
NEDD8-201ENST00000250495 LGI1O95970 557 aa18.38■□□□□ 0.53
NEDD8-201ENST00000250495 F12P00748 615 aaPredicted RBP18.38■□□□□ 0.53
NEDD8-201ENST00000250495 BMP2P12643 396 aa18.38■□□□□ 0.53
NEDD8-201ENST00000250495 HOXB1P14653 301 aaPredicted RBP18.38■□□□□ 0.53
NEDD8-201ENST00000250495 GTF2E2P29084 291 aaKnown RBP18.38■□□□□ 0.53
NEDD8-201ENST00000250495 BBS10Q8TAM1 723 aa18.38■□□□□ 0.53
NEDD8-201ENST00000250495 TLCD1Q96CP7 247 aa18.38■□□□□ 0.53
NEDD8-201ENST00000250495 FBXO17Q96EF6 278 aa18.38■□□□□ 0.53
NEDD8-201ENST00000250495 SLC38A2Q96QD8 506 aa18.38■□□□□ 0.53
NEDD8-201ENST00000250495 LINC00470Q9BZP3 86 aa18.38■□□□□ 0.53
NEDD8-201ENST00000250495 PAIP1Q9H074 479 aaKnown RBP18.38■□□□□ 0.53
NEDD8-201ENST00000250495 MOV10Q9HCE1 1003 aaKnown RBP18.38■□□□□ 0.53
NEDD8-201ENST00000250495 A4GALTQ9NPC4 353 aa18.38■□□□□ 0.53
NEDD8-201ENST00000250495 RPS6KB2Q9UBS0 482 aa18.38■□□□□ 0.53
NEDD8-201ENST00000250495 USH1CQ9Y6N9 552 aa18.38■□□□□ 0.53
NEDD8-201ENST00000250495 YLPM1P49750 1951 aaKnown RBP18.38■□□□□ 0.53
NEDD8-201ENST00000250495 ARFGEF3Q5TH69 2177 aa18.37■□□□□ 0.53
NEDD8-201ENST00000250495 CRYAAP02489 173 aa18.37■□□□□ 0.53
NEDD8-201ENST00000250495 NUDT7P0C024 238 aa18.37■□□□□ 0.53
NEDD8-201ENST00000250495 ZNF43P17038 809 aa18.37■□□□□ 0.53
NEDD8-201ENST00000250495 STX1BP61266 288 aa18.37■□□□□ 0.53
NEDD8-201ENST00000250495 VLDLRP98155 873 aa18.37■□□□□ 0.53
NEDD8-201ENST00000250495 SWI5Q1ZZU3 235 aa18.37■□□□□ 0.53
NEDD8-201ENST00000250495 C6orf52Q5T4I8 152 aa18.37■□□□□ 0.53
NEDD8-201ENST00000250495 EPGNQ6UW88 154 aa18.37■□□□□ 0.53
NEDD8-201ENST00000250495 MAGEE2Q8TD90 523 aaPredicted RBP18.37■□□□□ 0.53
NEDD8-201ENST00000250495 C10orf105Q8TEF2 133 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms