RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 SHC1P29353 583 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 EVI2BP34910 448 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 PNLIPRP2P54317 469 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 OR2B6P58173 313 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 DMWDQ09019 674 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 CBX3Q13185 183 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 ACSM3Q53FZ2 586 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 EMC4Q5J8M3 183 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 RHBDD2Q6NTF9 364 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 ZNF544Q6NX49 715 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 SFXN4Q6P4A7 337 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 RPL22L1Q6P5R6 122 aaKnown RBP7.53□□□□□ -1.2
VAMP3-201ENST00000054666 POMZP3Q6PJE2 187 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 NUP54Q7Z3B4 507 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 RABEPKQ7Z6M1 372 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 LRRC28Q86X40 367 aaPredicted RBP7.53□□□□□ -1.2
VAMP3-201ENST00000054666 RFLNBQ8N5W9 214 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 CELF2-AS1Q8N7Q2 184 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 ZBTB8BQ8NAP8 495 aaPredicted RBP7.53□□□□□ -1.2
VAMP3-201ENST00000054666 PLPP5Q8NEB5 264 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 NLGN4YQ8NFZ3 816 aaPredicted RBP7.53□□□□□ -1.2
VAMP3-201ENST00000054666 THAP4Q8WY91 577 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 GHSRQ92847 366 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 PELI1Q96FA3 418 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 Q96M85 177 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 MOGAT1Q96PD6 335 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 TTYH2Q9BSA4 534 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 NMNAT2Q9BZQ4 307 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 NPAP1Q9NZP6 1156 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 ST6GALNAC2Q9UJ37 374 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 PAIP2BQ9ULR5 123 aaKnown RBP7.53□□□□□ -1.2
VAMP3-201ENST00000054666 MOKQ9UQ07 419 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 ADAMTS20P59510 1910 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 SDK1Q7Z5N4 2213 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 TRAV36DV7A0A075B6V5 113 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 CPED1A4D0V7 1026 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 SCO2O43819 266 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 RENP00797 406 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 PRKAR1AP10644 381 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 MST1P26927 711 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 UQCRC1P31930 480 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 CASP3P42574 277 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 RPS5P46782 204 aaKnown RBP7.52□□□□□ -1.2
VAMP3-201ENST00000054666 EVX1P49640 407 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 TMED10P49755 219 aaKnown RBP7.52□□□□□ -1.2
VAMP3-201ENST00000054666 SLC25A1P53007 311 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 SIRPAP78324 504 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 EGR4Q05215 589 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 RPL18Q07020 188 aaKnown RBP7.52□□□□□ -1.2
VAMP3-201ENST00000054666 CD300CQ08708 224 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 MADCAM1Q13477 382 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 CARTPTQ16568 116 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 CCDC58Q4VC31 144 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 AGAP6Q5VW22 663 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 GPR139Q6DWJ6 353 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 MZT2BQ6NZ67 158 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 LANCL3Q6ZV70 420 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 FAM122BQ7Z309 247 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 MARCH3Q86UD3 253 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 OR2T4Q8NH00 348 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 STT3BQ8TCJ2 826 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 ZPLD1Q8TCW7 415 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 AGAP4Q96P64 663 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 LPAR4Q99677 370 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 ALG12Q9BV10 488 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 RXFP3Q9NSD7 469 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 ACOXLQ9NUZ1 547 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 NCDNQ9UBB6 729 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 EXTL2Q9UBQ6 330 aa7.52□□□□□ -1.2
VAMP3-201ENST00000054666 CABIN1Q9Y6J0 2220 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 RP1P56715 2156 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 TRBV2A0A0J9YWF9 115 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 DVL2O14641 736 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 KHNYNO15037 678 aaKnown RBP7.52□□□□□ -1.21
VAMP3-201ENST00000054666 OGG1O15527 345 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 GPRIN2O60269 458 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 GATBO75879 557 aaKnown RBP7.52□□□□□ -1.21
VAMP3-201ENST00000054666 F13BP05160 661 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 HEXBP07686 556 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 ANKRD34CP0C6C1 535 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 RAB3BP20337 219 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 APEX1P27695 318 aaKnown RBP7.52□□□□□ -1.21
VAMP3-201ENST00000054666 RBMS1P29558 406 aaKnown RBP7.52□□□□□ -1.21
VAMP3-201ENST00000054666 P2RX1P51575 399 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 POLR2HP52434 150 aaKnown RBP7.52□□□□□ -1.21
VAMP3-201ENST00000054666 EFNA3P52797 238 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 HCCSP53701 268 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 RIN1Q13671 783 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 EFR3AQ14156 821 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 SHBQ15464 509 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 FAM27D1Q5T7N8 215 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 SHISA6Q6ZSJ9 500 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 SPATC1Q76KD6 591 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 MAMDC2Q7Z304 686 aaPredicted RBP7.52□□□□□ -1.21
VAMP3-201ENST00000054666 PXKQ7Z7A4 578 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 MISPQ8IVT2 679 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 TEX19Q8NA77 164 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 HAVCR2Q8TDQ0 301 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 METTL21AQ8WXB1 218 aa7.52□□□□□ -1.21
VAMP3-201ENST00000054666 KTI12Q96EK9 354 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms