RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 WDFY2Q96P53 400 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 PDCD10Q9BUL8 212 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR51J1Q9H342 316 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 LMAN1LQ9HAT1 526 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 FAM60AQ9NP50 221 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 PCNX2A6NKB5 2137 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 PI4KAP42356 2102 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 TLX3O43711 291 aaPredicted RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 HOXB9P17482 250 aaPredicted RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZIC1Q15915 447 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 PRSS53Q2L4Q9 553 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 DEFB133Q30KQ1 61 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 ARHGAP11BQ3KRB8 267 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR7E24Q6IFN5 339 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 MED25Q71SY5 747 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 SDR16C5Q8N3Y7 309 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 MORN4Q8NDC4 146 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR6N1Q8NGY5 312 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 BRIX1Q8TDN6 353 aaKnown RBP5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 VWCEQ96DN2 955 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 MSLNLQ96KJ4 702 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 PSD2Q9BQI7 771 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 DEFB126Q9BYW3 111 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 B3GNT4Q9C0J1 378 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR10A5Q9H207 317 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 NIPAL2Q9H841 368 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 TRAPPC4Q9Y296 219 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 PARP14Q460N5 1801 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 KIF26BQ2KJY2 2108 aa5.2□□□□□ -1.58
SYNCRIP-204ENST00000616122 DOCK10Q96BY6 2186 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF407Q9C0G0 2248 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 NAV2Q8IVL1 2488 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 M0R233 179 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 HCRTR1O43613 425 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 KIR2DL3P43628 341 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 LIMS1P48059 325 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 ART1P52961 327 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 BTG2P78543 158 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 GALK2Q01415 458 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 DUSP2Q05923 314 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 ARFRP1Q13795 201 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 TOMM20Q15388 145 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR5M10Q6IEU7 315 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 SFTPA2Q8IWL1 248 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 SYS1Q8N2H4 156 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR4N2Q8NGD1 307 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR56B4Q8NH76 319 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 KIAA1143Q96AT1 154 aaPredicted RBP5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 ELSPBP1Q96BH3 223 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 STACQ99469 402 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 TCEAL2Q9H3H9 227 aaPredicted RBP5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 SDHAF3Q9NRP4 125 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 V9GY05 133 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 DSPPQ9NZW4 1301 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 MEGF11A6BM72 1044 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 A6NL46 340 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 H7C1C5 153 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF749O43361 778 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 MAS1P04201 325 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 H2AFB2P0C5Z0 115 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 TACR3P29371 465 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 PRSS3P35030 304 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 ARPC4P59998 168 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 RRAS2P62070 204 aaPredicted RBP5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 LCN6P62502 163 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 MANEAQ5SRI9 462 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 C1orf189Q5VU69 101 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 GLT8D1Q68CQ7 371 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 SLC6A19Q695T7 634 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF836Q6ZNA1 936 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF101Q8IZC7 436 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 ASB12Q8WXK4 309 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 PTP4A1Q93096 173 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 SLC25A44Q96H78 314 aaPredicted RBP5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 MDC1Q14676 2089 aaKnown RBP5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 A0A087WV62 115 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 TRABD2BA6NFA1 517 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 ANKRD61A6NGH8 418 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 P2RX6O15547 441 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 CDC40O60508 579 aaKnown RBP eCLIP5.19□□□□□ -1.586e-6■■■■■ 29.1
SYNCRIP-204ENST00000616122 FZD7O75084 574 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF217O75362 1048 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 SLC43A1O75387 559 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 IFNA7P01567 189 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF136P52737 540 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 INSL4Q14641 139 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 ATXN7L3Q14CW9 347 aaPredicted RBP5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 GFOD2Q3B7J2 385 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 GPR139Q6DWJ6 353 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF767PQ75MW2 155 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 SLC35D2Q76EJ3 337 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 IL17RDQ8NFM7 739 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR6F1Q8NGZ6 308 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF417Q8TAU3 575 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 DEDD2Q8WXF8 326 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 PELI1Q96FA3 418 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 PPIL3Q9H2H8 161 aaKnown RBP5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 PLEKHA1Q9HB21 404 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 KLHL9Q9P2J3 617 aa5.19□□□□□ -1.58
SYNCRIP-204ENST00000616122 KLHL21Q9UJP4 597 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms