RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 SEC11CQ9BY50 192 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 OR51M1Q9H341 326 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 SPACA1Q9HBV2 294 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 SLCO3A1Q9UIG8 710 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 GOLT1BQ9Y3E0 138 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 FOCADQ5VW36 1801 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 ANHXE9PGG2 379 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 LGI1O95970 557 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 S1PR4O95977 384 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 RPA2P15927 270 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 RPS15AP62244 130 aaKnown RBP8.21□□□□□ -1.1
TTC28-208ENST00000612946 CST9LP1Q5W188 147 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 OVCH2Q7RTZ1 564 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 UMODL1-AS1Q8N2C9 162 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 SLC22A12Q96S37 553 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 OCEL1Q9H607 264 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 SIDT1Q9NXL6 827 aaKnown RBP8.21□□□□□ -1.1
TTC28-208ENST00000612946 FBXL2Q9UKC9 423 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 IQCF5A8MTL0 148 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 SYT5O00445 386 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 DEDDO75618 318 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 TCTAP57738 103 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 UGCGQ16739 394 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 SHARPINQ9H0F6 387 aa8.21□□□□□ -1.1
TTC28-208ENST00000612946 APOBEC3GQ9HC16 384 aaKnown RBP8.21□□□□□ -1.1
TTC28-208ENST00000612946 FBRSL1Q9HCM7 1045 aaKnown RBP8.21□□□□□ -1.1
TTC28-208ENST00000612946 BRINP1O60477 761 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 GGT5P36269 586 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 PLP2Q04941 152 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 SLC35D3Q5M8T2 416 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 LILRA2Q8N149 483 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 OR6K3Q8NGY3 331 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 ZNF275Q9NSD4 429 aaPredicted RBP8.2□□□□□ -1.1
TTC28-208ENST00000612946 ASIC5Q9NY37 505 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 NDRG4Q9ULP0 352 aaKnown RBP8.2□□□□□ -1.1
TTC28-208ENST00000612946 RGPD8O14715 1765 aaPredicted RBP8.2□□□□□ -1.1
TTC28-208ENST00000612946 C1orf167Q5SNV9 1468 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 ACOT8O14734 319 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 SCO2O43819 266 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 ITGB2P05107 769 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 DUSP1P28562 367 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 LY6KQ17RY6 165 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 ISCA2Q86U28 154 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 GLIS1Q8NBF1 620 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 NAXEQ8NCW5 288 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 OR10G6Q8NH81 332 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 SEC61A2Q9H9S3 476 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 EHFQ9NZC4 300 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 INTS1Q8N201 2190 aaKnown RBP8.2□□□□□ -1.1
TTC28-208ENST00000612946 USF1P22415 310 aaPredicted RBP8.2□□□□□ -1.1
TTC28-208ENST00000612946 CSF2RBP32927 897 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 TSPAN31Q12999 210 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 NPY5RQ15761 445 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 CPA6Q8N4T0 437 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 ZFP41Q8N8Y5 198 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 OR10Q1Q8NGQ4 319 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 NKX3-1Q99801 234 aaPredicted RBP8.2□□□□□ -1.1
TTC28-208ENST00000612946 VIPR1P32241 457 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 PPP1CBP62140 327 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 OR13C4Q8NGS5 318 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 TMEM19Q96HH6 336 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 SLC35B3Q9H1N7 401 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 RGPD5Q99666 1765 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 SLC9B1P1A6NJY1 282 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 HIDE1A8MVS5 230 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 NCR1O76036 304 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 MMP15P51511 669 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 CLEC20AQ6ZU45 233 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 NRSN1Q8IZ57 195 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 GALNT16Q8N428 558 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 OR52E2Q8NGJ4 325 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 SFT2D1Q8WV19 159 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 C4orf36Q96KX1 117 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 ARHGDIGQ99819 225 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 TRMT61BQ9BVS5 477 aaKnown RBP8.2□□□□□ -1.1
TTC28-208ENST00000612946 PARD6AQ9NPB6 346 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 DGKZQ13574 1117 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 NUP43Q8NFH3 380 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 OR4F15Q8NGB8 312 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 PCED1BQ96HM7 432 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 C1orf198Q9H425 327 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 H3BQ06 376 aaPredicted RBP8.2□□□□□ -1.1
TTC28-208ENST00000612946 PTHP01270 115 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 CT45A8P0DMV1 189 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 CT45A9P0DMV2 189 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 ITGB8P26012 769 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 RPS25P62851 125 aaKnown RBP8.2□□□□□ -1.1
TTC28-208ENST00000612946 HABP2Q14520 560 aaPredicted RBP8.2□□□□□ -1.1
TTC28-208ENST00000612946 CT45A2Q5DJT8 189 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 GGNBP1Q5YKI7 109 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 C14orf80Q86SX3 495 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 SLC24A4Q8NFF2 622 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 BORCS6Q96GS4 357 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 SUV39H2Q9H5I1 410 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 CRYBG1Q9Y4K1 1723 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 CSTAP01040 98 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 RING1Q06587 406 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 VWA2Q5GFL6 755 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 TPRG1Q6ZUI0 275 aa8.2□□□□□ -1.1
TTC28-208ENST00000612946 OR9Q2Q8NGE9 314 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms