RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 AGAP5A6NIR3 686 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 ZNF587BE7ETH6 402 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 ZNF208O43345 1280 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 TYROBPO43914 113 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 F12P00748 615 aaPredicted RBP11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 C8BP07358 591 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 CDKN2CP42773 168 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 ETV4P43268 484 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 NR4A2P43354 598 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 VSNL1P62760 191 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 EPS8Q12929 822 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 SMU1Q2TAY7 513 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 KRT71Q3SY84 523 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 TBRG1Q3YBR2 411 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 COX20Q5RI15 118 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 FAM120AOSQ5T036 256 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 TMEM225Q6GV28 225 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 ABHD12BQ7Z5M8 362 aaPredicted RBP11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 CMIPQ8IY22 773 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 TRIML2Q8N7C3 387 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 POMGNT2Q8NAT1 580 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 OIT3Q8WWZ8 545 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 TESCQ96BS2 214 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 MSI2Q96DH6 328 aaKnown RBP11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 ZIM3Q96PE6 472 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 TRNT1Q96Q11 434 aaKnown RBP11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 SLC38A2Q96QD8 506 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 RLIMQ9NVW2 624 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 TMEM160Q9NX00 188 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 RAP2CQ9Y3L5 183 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 LIPT2A6NK58 231 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 AQP7P3A6NL99 342 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 NR5A2O00482 541 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 CRYAAP02489 173 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 DBIP07108 87 aaKnown RBP11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 NCF2P19878 526 aaPredicted RBP11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 BGNP21810 368 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 SERPINF1P36955 418 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 SLC1A6P48664 564 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 SELENOPP49908 381 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 RPL14P50914 215 aaKnown RBP11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 COPZ1P61923 177 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 UFM1P61960 85 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 DPY19L1Q2PZI1 675 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 PRAMEF8Q5VWM4 474 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 PRAMEF7Q5VXH5 474 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 ATG16L1Q676U5 607 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 NIPAL3Q6P499 406 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 ZNF836Q6ZNA1 936 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 LRRC74BQ6ZQY2 392 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 VRK2Q86Y07 508 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 PEX5LQ8IYB4 626 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 ZIC4Q8N9L1 334 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 OR1K1Q8NGR3 316 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 TMEM45BQ96B21 275 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 TEX37Q96LM6 180 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 CCDC115Q96NT0 180 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 OR52E6Q96RD3 313 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 PAIP2Q9BPZ3 127 aaKnown RBP11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 PRR14Q9BWN1 585 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 BPESC1Q9GZL8 116 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 C20orf27Q9GZN8 174 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 CENPHQ9H3R5 247 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 SEC61A2Q9H9S3 476 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 CA10Q9NS85 328 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 TMEM45AQ9NWC5 275 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 BTNL2Q9UIR0 455 aa11.64□□□□□ -0.55
HMGB1P24-201ENST00000611897 SH3PXD2BA1X283 911 aa11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 LRP5LA4QPB2 252 aa11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 FRS3O43559 492 aa11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 TGFAP01135 160 aa11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 BCHEP06276 602 aa11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 GUSBP08236 651 aa11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 ALDOCP09972 364 aaKnown RBP11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 OR4A8P0C604 315 aa11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 GTF2E2P29084 291 aaKnown RBP11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 NPRL3Q12980 569 aa11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 SWI5Q1ZZU3 235 aa11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 MST1LQ2TV78 715 aa11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 RPS26P11Q5JNZ5 115 aaPredicted RBP11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 SLC25A36Q96CQ1 311 aa11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 TRIM44Q96DX7 344 aaPredicted RBP11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 SORT1Q99523 831 aa11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 ZBTB18Q99592 522 aa11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 ROPN1BQ9BZX4 212 aaPredicted RBP11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 ROPN1Q9HAT0 212 aaPredicted RBP11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 CACYBPQ9HB71 228 aaKnown RBP11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 PNPOQ9NVS9 261 aa11.63□□□□□ -0.55
HMGB1P24-201ENST00000611897 LOC390937A0A1W2PQ73 354 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 VWC2LB2RUY7 222 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 NDUFS8O00217 210 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 RGS16O15492 202 aaPredicted RBP11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 AHSA1O95433 338 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 CECR9P0C854 216 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 PRG2P13727 222 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 RPS4Y1P22090 263 aaKnown RBP11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 IL12AP29459 219 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 CRATP43155 626 aa11.62□□□□□ -0.55
HMGB1P24-201ENST00000611897 CAPZA2P47755 286 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms