RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 C12orf49Q9H741 205 aa14.36□□□□□ -0.11
LSM4-206ENST00000600289 ELOA3DA6NLF2 546 aaPredicted RBP14.35□□□□□ -0.11
LSM4-206ENST00000600289 ZNF814B7Z6K7 855 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 FTCDNL1E5RQL4 147 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 NDUFAB1O14561 156 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 AIM2O14862 343 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 TPST2O60704 377 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 OPN1SWP03999 348 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 FPR1P21462 350 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 EGR4Q05215 589 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 BNIP2Q12982 314 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 ELOA3BQ3SY89 546 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 ALG10BQ5I7T1 473 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 ZNF613Q6PF04 617 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 STAC2Q6ZMT1 411 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 SLC15A3Q8IY34 581 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 ELOA3Q8NG57 546 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 OR2T12Q8NG77 320 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 MFSD8Q8NHS3 518 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 SLC47A1Q96FL8 570 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 WFDC6Q9BQY6 131 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 PTDSS2Q9BVG9 487 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 SF3B5Q9BWJ5 86 aaKnown RBP14.35□□□□□ -0.11
LSM4-206ENST00000600289 TMEM27Q9HBJ8 222 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 RASSF1Q9NS23 344 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 CMTM6Q9NX76 183 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 FAM53CQ9NYF3 392 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 GPR52Q9Y2T5 361 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 ARL2BPQ9Y2Y0 163 aa14.35□□□□□ -0.11
LSM4-206ENST00000600289 A0A087WUJ7 227 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 AQP7P3A6NL99 342 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 AHSA1O95433 338 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 IFNA14P01570 189 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 CEACAM7Q14002 265 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 SLC17A1Q14916 467 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 P2RY6Q15077 328 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 OR1Q1Q15612 314 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 NPTX1Q15818 432 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 Q6ZT83 130 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 MICU2Q8IYU8 434 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 ANKS4BQ8N8V4 417 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 OR6T1Q8NGN1 323 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 OR6S1Q8NH40 331 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 SLC26A7Q8TE54 656 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 TAPBPLQ9BX59 468 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 HDHD5Q9BXW7 423 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 ABCD2Q9UBJ2 740 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 BAG5Q9UL15 447 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 USP22Q9UPT9 525 aa14.34□□□□□ -0.11
LSM4-206ENST00000600289 IGKV1D-42A0A075B6H8 117 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 ELOVL7A1L3X0 281 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 CCT8L1PA6NM43 557 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 M0R3H8 397 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 NME4O00746 187 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 OR2T1O43869 369 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 RAMP1O60894 148 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 VAMP5O95183 116 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 NUDT2P50583 147 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 P2RY4P51582 365 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 POU4F3Q15319 338 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 OR7A5Q15622 319 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 EXOC3L2Q2M3D2 409 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 OTUD3Q5T2D3 398 aaPredicted RBP14.33□□□□□ -0.12
LSM4-206ENST00000600289 LINC00114Q6XXX2 140 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 TMEM200AQ86VY9 491 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 CCDC103Q8IW40 242 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 TMEM45BQ96B21 275 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 DNAJA3Q96EY1 480 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 WFIKKN1Q96NZ8 548 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 MCHR1Q99705 422 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 USB1Q9BQ65 265 aaKnown RBP14.33□□□□□ -0.12
LSM4-206ENST00000600289 TMEM43Q9BTV4 400 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 PRR14Q9BWN1 585 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 POLR2J2Q9GZM3 115 aaKnown RBP14.33□□□□□ -0.12
LSM4-206ENST00000600289 POLR2J3Q9H1A7 115 aaKnown RBP14.33□□□□□ -0.12
LSM4-206ENST00000600289 ZNF226Q9NYT6 803 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 SELENONQ9NZV5 590 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 SLC9A8Q9Y2E8 581 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 FLVCR1Q9Y5Y0 555 aa14.33□□□□□ -0.12
LSM4-206ENST00000600289 RAI1Q7Z5J4 1906 aaPredicted RBP14.33□□□□□ -0.12
LSM4-206ENST00000600289 TRAV36DV7A0A075B6V5 113 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 CHP2O43745 196 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 DCTN3O75935 186 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 COX5AP20674 150 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 CRYGSP22914 178 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 KDELR2P33947 212 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 SLC7A2P52569 658 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 CDH12P55289 794 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 LIPEQ05469 1076 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 SFRP5Q5T4F7 317 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 FAM69AQ5T7M9 428 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 TGIF2LYQ8IUE0 185 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 TMEM99Q8N816 258 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 STEAP2Q8NFT2 490 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 OR4D11Q8NGI4 311 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 KTI12Q96EK9 354 aaPredicted RBP14.32□□□□□ -0.12
LSM4-206ENST00000600289 KLHL4Q9C0H6 718 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 RASD1Q9Y272 281 aa14.32□□□□□ -0.12
LSM4-206ENST00000600289 NOSIPQ9Y314 301 aaKnown RBP14.32□□□□□ -0.12
LSM4-206ENST00000600289 CSPG4Q6UVK1 2322 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms