RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 BCHEP06276 602 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 CXCR1P25024 350 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 NUDT6P53370 316 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 DSTNP60981 165 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 SLC17A1Q14916 467 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 MAPK11Q15759 364 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 RPS26P11Q5JNZ5 115 aaPredicted RBP16.11■□□□□ 0.17
CIRBP-237ENST00000592234 OTUD3Q5T2D3 398 aaPredicted RBP16.11■□□□□ 0.17
CIRBP-237ENST00000592234 PAQR6Q6TCH4 344 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 MSANTD1Q6ZTZ1 278 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 ZNF440Q8IYI8 595 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 MUC15Q8N387 334 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 GTF2H4Q92759 462 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 MAGEB18Q96M61 343 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 RHNO1Q9BSD3 238 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 SLC7A10Q9NS82 523 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 RLIMQ9NVW2 624 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 P2RX2Q9UBL9 471 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 DCTN4Q9UJW0 460 aa16.11■□□□□ 0.17
CIRBP-237ENST00000592234 YLPM1P49750 1951 aaKnown RBP16.11■□□□□ 0.17
CIRBP-237ENST00000592234 PDLIM1O00151 329 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 CD5LO43866 347 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 GPIP06744 558 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 GKN3PP0CG01 181 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 FABP6P51161 128 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 IRX1P78414 480 aaPredicted RBP16.1■□□□□ 0.17
CIRBP-237ENST00000592234 TGFBR3Q03167 851 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 CEACAM7Q14002 265 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 LIN52Q52LA3 116 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 TSPO2Q5TGU0 170 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 C11orf71Q6IPW1 123 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 ZNF836Q6ZNA1 936 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 VRK2Q86Y07 508 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 FUNDC1Q8IVP5 155 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 C17orf78Q8N4C9 275 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 C1orf162Q8NEQ5 155 aaPredicted RBP16.1■□□□□ 0.17
CIRBP-237ENST00000592234 OR52P1PQ8NH57 321 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 AMBRA1Q9C0C7 1298 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 ADAM19Q9H013 955 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 PAIP1Q9H074 479 aaKnown RBP16.1■□□□□ 0.17
CIRBP-237ENST00000592234 CALML5Q9NZT1 146 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 AMDHD2Q9Y303 409 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 PCDHB14Q9Y5E9 798 aa16.1■□□□□ 0.17
CIRBP-237ENST00000592234 CDHR4A6H8M9 788 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 TLX2O43763 284 aaPredicted RBP16.09■□□□□ 0.17
CIRBP-237ENST00000592234 AKR7A3O95154 331 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 NUDT7P0C024 238 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 ZCCHC18P0CG32 403 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 CRISP3P54108 245 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 COPZ1P61923 177 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 OR7A5Q15622 319 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 AGKQ53H12 422 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 B3GLCTQ6Y288 498 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 CADM2Q8N3J6 435 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 TMEM99Q8N816 258 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 WDR31Q8NA23 367 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 TMEM45BQ96B21 275 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 SPDL1Q96EA4 605 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 TMEM19Q96HH6 336 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 NPHS2Q9NP85 383 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 SLC17A5Q9NRA2 495 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 YAE1D1Q9NRH1 226 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 SLAMF8Q9P0V8 285 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 ATP23Q9Y6H3 246 aa16.09■□□□□ 0.17
CIRBP-237ENST00000592234 LIPT2A6NK58 231 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 CLIC1O00299 241 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 NCF2P19878 526 aaPredicted RBP16.08■□□□□ 0.16
CIRBP-237ENST00000592234 MPGP29372 298 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 SF3A3Q12874 501 aaKnown RBP eCLIP16.08■□□□□ 0.162e-10■■■□□ 15.8
CIRBP-237ENST00000592234 RAB35Q15286 201 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 PAGE3Q5JUK9 113 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 WBP2NLQ6ICG8 309 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 ZNF544Q6NX49 715 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 BLOC1S3Q6QNY0 202 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 KLHL24Q6TFL4 600 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 CLEC2AQ6UVW9 174 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 AAED1Q7RTV5 226 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 GPAT4Q86UL3 456 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 OR9K2Q8NGE7 335 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 SLC38A5Q8WUX1 472 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 SF3B5Q9BWJ5 86 aaKnown RBP16.08■□□□□ 0.16
CIRBP-237ENST00000592234 TAPBPLQ9BX59 468 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 FKRPQ9H9S5 495 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 ZNF443Q9Y2A4 671 aaPredicted RBP16.08■□□□□ 0.16
CIRBP-237ENST00000592234 DSPPQ9NZW4 1301 aa16.08■□□□□ 0.16
CIRBP-237ENST00000592234 ARFGEF3Q5TH69 2177 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 IGHV4-30-2A0A087WSY4 118 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 A0A096LPI6 279 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 TMEM247A6NEH6 219 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 AQP7P3A6NL99 342 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 CDH2P19022 906 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-237ENST00000592234 ACAA2P42765 397 aaKnown RBP16.07■□□□□ 0.16
CIRBP-237ENST00000592234 MRPL19P49406 292 aaKnown RBP16.07■□□□□ 0.16
CIRBP-237ENST00000592234 DSCR9P59020 149 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 PRPS1P60891 318 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 SLC25A3Q00325 362 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 BNIP2Q12982 314 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 SQLEQ14534 574 aa16.07■□□□□ 0.16
CIRBP-237ENST00000592234 LARS2Q15031 903 aaKnown RBP16.07■□□□□ 0.16
CIRBP-237ENST00000592234 RGNQ15493 299 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms