RNA–Protein interactions for RNA: ENST00000579558.5

SHMT1-206, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2

Gene SHMT1, Length 1,077 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-206ENST00000579558 STK11Q15831 433 aa21.11■□□□□ 0.97
SHMT1-206ENST00000579558 COQ5Q5HYK3 327 aa21.11■□□□□ 0.97
SHMT1-206ENST00000579558 NANOGP8Q6NSW7 305 aa21.11■□□□□ 0.97
SHMT1-206ENST00000579558 SNX32Q86XE0 403 aa21.11■□□□□ 0.97
SHMT1-206ENST00000579558 DNAJA4Q8WW22 397 aaPredicted RBP21.11■□□□□ 0.97
SHMT1-206ENST00000579558 LRRC58Q96CX6 371 aa21.11■□□□□ 0.97
SHMT1-206ENST00000579558 EVA1AQ9H8M9 152 aa21.11■□□□□ 0.97
SHMT1-206ENST00000579558 NANOGQ9H9S0 305 aa21.11■□□□□ 0.97
SHMT1-206ENST00000579558 PARPBPQ9NWS1 579 aa21.11■□□□□ 0.97
SHMT1-206ENST00000579558 PRR14LQ5THK1 2151 aa21.11■□□□□ 0.97
SHMT1-206ENST00000579558 M0QX08 132 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 PCGF2P35227 344 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 ACKR1Q16570 336 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 ALG10BQ5I7T1 473 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 TMEM225Q6GV28 225 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 GPAT4Q86UL3 456 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 OR9K2Q8NGE7 335 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 MFSD8Q8NHS3 518 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 C10orf82Q8WW14 230 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 ZNF317Q96PQ6 595 aaPredicted RBP21.1■□□□□ 0.97
SHMT1-206ENST00000579558 SH3GL1Q99961 368 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 SF3B5Q9BWJ5 86 aaKnown RBP21.1■□□□□ 0.97
SHMT1-206ENST00000579558 PIF1Q9H611 641 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 TMEM27Q9HBJ8 222 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 NGBQ9NPG2 151 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 ASB6Q9NWX5 421 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 SELENONQ9NZV5 590 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 CAPN7Q9Y6W3 813 aa21.1■□□□□ 0.97
SHMT1-206ENST00000579558 LOC100653049A0A140TA62 436 aa21.09■□□□□ 0.97
SHMT1-206ENST00000579558 FXYD1O00168 92 aa21.09■□□□□ 0.97
SHMT1-206ENST00000579558 KRT34O76011 436 aa21.09■□□□□ 0.97
SHMT1-206ENST00000579558 PNMTP11086 282 aa21.09■□□□□ 0.97
SHMT1-206ENST00000579558 GGT1P19440 569 aa21.09■□□□□ 0.97
SHMT1-206ENST00000579558 RPS5P46782 204 aaKnown RBP21.09■□□□□ 0.97
SHMT1-206ENST00000579558 EGR4Q05215 589 aa21.09■□□□□ 0.97
SHMT1-206ENST00000579558 FAPQ12884 760 aa21.09■□□□□ 0.97
SHMT1-206ENST00000579558 RABL3Q5HYI8 236 aa21.09■□□□□ 0.97
SHMT1-206ENST00000579558 INTS11Q5TA45 600 aaKnown RBP21.09■□□□□ 0.97
SHMT1-206ENST00000579558 ULK3Q6PHR2 472 aa21.09■□□□□ 0.97
SHMT1-206ENST00000579558 ZNF704Q6ZNC4 412 aaPredicted RBP21.09■□□□□ 0.97
SHMT1-206ENST00000579558 PATL1Q86TB9 770 aaKnown RBP21.09■□□□□ 0.97
SHMT1-206ENST00000579558 RANBP3LQ86VV4 465 aaPredicted RBP21.09■□□□□ 0.97
SHMT1-206ENST00000579558 ZNF433Q8N7K0 673 aaPredicted RBP21.09■□□□□ 0.97
SHMT1-206ENST00000579558 OR8J3Q8NGG0 315 aa21.09■□□□□ 0.97
SHMT1-206ENST00000579558 RNF217Q8TC41 542 aa21.09■□□□□ 0.97
SHMT1-206ENST00000579558 SLC25A36Q96CQ1 311 aa21.09■□□□□ 0.97
SHMT1-206ENST00000579558 KTI12Q96EK9 354 aaPredicted RBP21.09■□□□□ 0.97
SHMT1-206ENST00000579558 WFDC6Q9BQY6 131 aa21.09■□□□□ 0.97
SHMT1-206ENST00000579558 PTDSS2Q9BVG9 487 aa21.09■□□□□ 0.97
SHMT1-206ENST00000579558 MALT1Q9UDY8 824 aa21.09■□□□□ 0.97
SHMT1-206ENST00000579558 PRRC2AP48634 2157 aaKnown RBP21.09■□□□□ 0.97
SHMT1-206ENST00000579558 CIB4A0PJX0 185 aa21.08■□□□□ 0.97
SHMT1-206ENST00000579558 CCT8L1PA6NM43 557 aa21.08■□□□□ 0.97
SHMT1-206ENST00000579558 NPPAP01160 153 aa21.08■□□□□ 0.97
SHMT1-206ENST00000579558 GTF2E2P29084 291 aaKnown RBP21.08■□□□□ 0.97
SHMT1-206ENST00000579558 GZMMP51124 257 aa21.08■□□□□ 0.97
SHMT1-206ENST00000579558 P2RY4P51582 365 aa21.08■□□□□ 0.97
SHMT1-206ENST00000579558 OR1Q1Q15612 314 aa21.08■□□□□ 0.97
SHMT1-206ENST00000579558 DUSP7Q16829 419 aa21.08■□□□□ 0.97
SHMT1-206ENST00000579558 VMACQ2NL98 169 aa21.08■□□□□ 0.97
SHMT1-206ENST00000579558 FAM91A1Q658Y4 838 aa21.08■□□□□ 0.97
SHMT1-206ENST00000579558 C5orf46Q6UWT4 87 aa21.08■□□□□ 0.97
SHMT1-206ENST00000579558 GPR32P1Q8NGA4 272 aa21.08■□□□□ 0.97
SHMT1-206ENST00000579558 TMEM45BQ96B21 275 aa21.08■□□□□ 0.97
SHMT1-206ENST00000579558 SLC47A1Q96FL8 570 aa21.08■□□□□ 0.97
SHMT1-206ENST00000579558 ECSITQ9BQ95 431 aa21.08■□□□□ 0.97
SHMT1-206ENST00000579558 BEX4Q9NWD9 120 aaPredicted RBP21.08■□□□□ 0.97
SHMT1-206ENST00000579558 UPB1Q9UBR1 384 aa21.08■□□□□ 0.97
SHMT1-206ENST00000579558 FTCDNL1E5RQL4 147 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 M0R3H8 397 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 TPST2O60704 377 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 RAD51DO75771 328 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 VAMP5O95183 116 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 LGI1O95970 557 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 PLAUP00749 431 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 PPA1Q15181 289 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 TIMM23BQ5SRD1 257 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 C20orf204Q6ZNR8 217 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 AAED1Q7RTV5 226 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 ZIC4Q8N9L1 334 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 PCYOX1LQ8NBM8 494 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 SLC26A7Q8TE54 656 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 SLC38A4Q969I6 547 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 MUCL1Q96DR8 90 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 ZNF385AQ96PM9 386 aaKnown RBP21.07■□□□□ 0.96
SHMT1-206ENST00000579558 ARHGDIGQ99819 225 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 TMEM204Q9BSN7 226 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 GID8Q9NWU2 228 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 TAS2R16Q9NYV7 291 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 ARMCX1Q9P291 453 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 RASD1Q9Y272 281 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 HIVEP1P15822 2718 aa21.07■□□□□ 0.96
SHMT1-206ENST00000579558 RAI1Q7Z5J4 1906 aaPredicted RBP21.06■□□□□ 0.96
SHMT1-206ENST00000579558 A0A0B4J2E0 115 aa21.06■□□□□ 0.96
SHMT1-206ENST00000579558 A0A1B0GX12 115 aa21.06■□□□□ 0.96
SHMT1-206ENST00000579558 SLC22A2O15244 555 aa21.06■□□□□ 0.96
SHMT1-206ENST00000579558 OR2T1O43869 369 aa21.06■□□□□ 0.96
SHMT1-206ENST00000579558 C8BP07358 591 aa21.06■□□□□ 0.96
SHMT1-206ENST00000579558 NRF1Q16656 503 aa21.06■□□□□ 0.96
SHMT1-206ENST00000579558 TSPO2Q5TGU0 170 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms