RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 RHBDD3Q9Y3P4 386 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 ASB4Q9Y574 426 aa11.15□□□□□ -0.62
ERBB2-206ENST00000578373 EP300Q09472 2414 aaPredicted RBP11.15□□□□□ -0.62
ERBB2-206ENST00000578373 TRABD2BA6NFA1 517 aa11.15□□□□□ -0.63
ERBB2-206ENST00000578373 EGFP01133 1207 aa11.15□□□□□ -0.63
ERBB2-206ENST00000578373 ACTBP60709 375 aa11.15□□□□□ -0.63
ERBB2-206ENST00000578373 ACTG1P63261 375 aa11.15□□□□□ -0.63
ERBB2-206ENST00000578373 DMRTC1Q5HYR2 192 aa11.15□□□□□ -0.63
ERBB2-206ENST00000578373 DHRS4L2Q6PKH6 230 aa11.15□□□□□ -0.63
ERBB2-206ENST00000578373 COX15Q7KZN9 410 aa11.15□□□□□ -0.63
ERBB2-206ENST00000578373 CCDC54Q8NEL0 328 aa11.15□□□□□ -0.63
ERBB2-206ENST00000578373 OR5D18Q8NGL1 313 aa11.15□□□□□ -0.63
ERBB2-206ENST00000578373 TIMM29Q9BSF4 260 aa11.15□□□□□ -0.63
ERBB2-206ENST00000578373 RBM24Q9BX46 236 aaKnown RBP11.15□□□□□ -0.63
ERBB2-206ENST00000578373 KCNN3Q9UGI6 736 aa11.15□□□□□ -0.63
ERBB2-206ENST00000578373 SLC6A5Q9Y345 797 aa11.15□□□□□ -0.63
ERBB2-206ENST00000578373 VSTM2BA6NLU5 285 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 NTN1O95631 604 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 TMEM225BP0DP42 221 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 AGERQ15109 404 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 ADAMTS14Q8WXS8 1223 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 ZNF566Q969W8 418 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 SMIM3Q9BZL3 60 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 ING1Q9UK53 422 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-206ENST00000578373 FLVCR2Q9UPI3 526 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 PEX14O75381 377 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 FPR3P25089 353 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 BSGP35613 385 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 RGS19P49795 217 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 LSM11P83369 360 aaKnown RBP eCLIP11.14□□□□□ -0.63
ERBB2-206ENST00000578373 TCTE1Q5JU00 501 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 BAIAP2L2Q6UXY1 529 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 MFSD9Q8NBP5 474 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 OR56B4Q8NH76 319 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 TBC1D20Q96BZ9 403 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 GABARAPL1Q9H0R8 117 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 PRAMEF4O60810 478 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 CRTAPO75718 401 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-206ENST00000578373 APOC1P02654 83 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 TACR3P29371 465 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 DLX5P56178 289 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 GPR50Q13585 617 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 PRAMEF9Q5VWM5 478 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 LINC00346Q8IVM7 164 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 PLPP7Q8NBV4 271 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 TOR1AIP2Q8NFQ8 470 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 ZNF417Q8TAU3 575 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 SDF2Q99470 211 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 CTRCQ99895 268 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 SGPP1Q9BX95 441 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 ACOXLQ9NUZ1 547 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 ABI3Q9P2A4 366 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 ADAM29Q9UKF5 820 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 ZNF281Q9Y2X9 895 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 NCOR1O75376 2440 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 TMEM269A0A1B0GVZ9 245 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 SBK2P0C263 348 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 PTHLHP12272 177 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 HOXB3P14651 431 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-206ENST00000578373 TGM1P22735 817 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 HERV-K104P61576 105 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 POU3F1Q03052 451 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-206ENST00000578373 LHX8Q68G74 356 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 TECPR1Q7Z6L1 1165 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 ZNF546Q86UE3 836 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 LAS2Q8IYD9 372 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 MFSD4AQ8N468 514 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 C7orf50Q9BRJ6 194 aaKnown RBP11.14□□□□□ -0.63
ERBB2-206ENST00000578373 EIF5A2Q9GZV4 153 aaKnown RBP11.14□□□□□ -0.63
ERBB2-206ENST00000578373 LIN7BQ9HAP6 207 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 ZNF304Q9HCX3 659 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 TAS2R8Q9NYW2 309 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 OR51B4Q9Y5P0 310 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 A3GALT2U3KPV4 340 aa11.14□□□□□ -0.63
ERBB2-206ENST00000578373 AKAP6Q13023 2319 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 SDK2Q58EX2 2172 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 CCDC163A0A0D9SF12 145 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 M0QYG6 137 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 ICMTO60725 284 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 ANXA7P20073 488 aaKnown RBP11.13□□□□□ -0.63
ERBB2-206ENST00000578373 RAE1P78406 368 aaKnown RBP11.13□□□□□ -0.63
ERBB2-206ENST00000578373 IL13RA1P78552 427 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 OR7G1Q8NGA0 311 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 DCUN1D4Q92564 292 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 DZANK1Q9NVP4 752 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 B3GALT1Q9Y5Z6 326 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 FAM221BA6H8Z2 402 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 F8W036 122 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 NPR2P20594 1047 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 KIR2DL3P43628 341 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 CSNK2A1P68400 391 aaPredicted RBP11.13□□□□□ -0.63
ERBB2-206ENST00000578373 BLOC1S1P78537 153 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 GBX1Q14549 363 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 MELKQ14680 651 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 OPCMLQ14982 345 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 Q6ZNB5 142 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 ABHD12BQ7Z5M8 362 aaPredicted RBP11.13□□□□□ -0.63
ERBB2-206ENST00000578373 CSNK2A3Q8NEV1 391 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 SCGB3A2Q96PL1 93 aa11.13□□□□□ -0.63
ERBB2-206ENST00000578373 OR5B2Q96R09 309 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms